RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 SSX4O60224 188 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SLC22A5O76082 557 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 RIDAP52758 137 aaKnown RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 CSNK2A1P68400 391 aaPredicted RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 RIPPLY1Q0D2K3 151 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 GPR176Q14439 515 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SMAD2Q15796 467 aaKnown RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ELP2Q6IA86 826 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 C10orf111Q8N326 155 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 NLGN4YQ8NFZ3 816 aaPredicted RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SCGB3A2Q96PL1 93 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SIDT1Q9NXL6 827 aaKnown RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 A0A087WUU8 490 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 TVP23AA6NH52 213 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ACOD1A6NK06 481 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 EEF1E1-BLOC1S5C9J1V9 151 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 KLRC4-KLRK1H3BQV0 150 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SYT5O00445 386 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 H2BFMP0C1H6 154 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 OPRD1P41143 372 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 TGFBR3Q03167 851 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 MALLQ13021 153 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 Q6ZNB5 142 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ADIPOR2Q86V24 386 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 CCDC54Q8NEL0 328 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 KCNE4Q8WWG9 221 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 SPNS1Q9H2V7 528 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ERVK-19Q9WJR5 959 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 NUPL2O15504 423 aaKnown RBP11.4□□□□□ -0.58
COLCA1-201ENST00000355430 TMPRSS11DO60235 418 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 C1QBP02746 253 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 PRSS3P35030 304 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 PRPS1P60891 318 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ZNF836Q6ZNA1 936 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 OR9A4Q8NGU2 314 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 OR56B4Q8NH76 319 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 TNFRSF13CQ96RJ3 184 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 TMEM43Q9BTV4 400 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 FN3KQ9H479 309 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 EMC3Q9P0I2 261 aa11.4□□□□□ -0.58
COLCA1-201ENST00000355430 ARRDC5A6NEK1 342 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 ITGA5P08648 1049 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 PRKAR1BP31321 381 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 RAB38P57729 211 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 FOXK2Q01167 660 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 EIF3IQ13347 325 aaKnown RBP11.4□□□□□ -0.59
COLCA1-201ENST00000355430 EXT1Q16394 746 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 FAM76BQ5HYJ3 339 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 FAM111BQ6SJ93 734 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 PFN4Q8NHR9 129 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 UBQLN3Q9H347 655 aa11.4□□□□□ -0.59
COLCA1-201ENST00000355430 AKR1C4P17516 323 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 GABRG2P18507 467 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 AGTR1P30556 359 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 DLSTP36957 453 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 FGL1Q08830 312 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 AIMP2Q13155 320 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 CRMP1Q14194 572 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 CARD17Q5XLA6 110 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 TMPRSS9Q7Z410 1059 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 CDH20Q9HBT6 801 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 TNS1Q9HBL0 1735 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 A0A1B0GX78 115 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 PEX14O75381 377 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF806P0C7X5 589 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 TNFRSF17Q02223 184 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 GALEQ14376 348 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 NKPD1Q17RQ9 610 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 MAMDC2Q7Z304 686 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 DEFB124Q8NES8 71 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZFAND1Q8TCF1 268 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SLC37A2Q8TED4 501 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SGPP1Q9BX95 441 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 FGF22Q9HCT0 170 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 TESQ9UGI8 421 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SLC35A3Q9Y2D2 325 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 RNF215Q9Y6U7 377 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZFC3H1O60293 1989 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SDK1Q7Z5N4 2213 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 DSCR3O14972 297 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 YY2O15391 372 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 GATBO75879 557 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ACTBP60709 375 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ACTG1P63261 375 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 CBFBQ13951 182 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SLC48A1Q6P1K1 146 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SYT4Q9H2B2 425 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 KIR3DX1Q9H7L2 352 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 EMC7Q9NPA0 242 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 MBNL1Q9NR56 388 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 WSB2Q9NYS7 404 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ATXN7L1Q9ULK2 861 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 MN1Q10571 1320 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF780AO75290 641 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 CSF1P09603 554 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 SLC18B1Q6NT16 456 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 RPL22L1Q6P5R6 122 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms