RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 NUP107P57740 925 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 OAFQ86UD1 273 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 TMEM99Q8N816 258 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ATG16L2Q8NAA4 619 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 OR5J2Q8NH18 312 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ZNF417Q8TAU3 575 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 GTPBP3Q969Y2 492 aaKnown RBP21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ZHX1-C8orf76Q96EF9 292 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ZNF587Q96SQ5 575 aaPredicted RBP21.69■■□□□ 1.06
HMGA2-201ENST00000354636 C9orf16Q9BUW7 83 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ASPNQ9BXN1 380 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 B3GALT5Q9Y2C3 310 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 KIAA1549Q9HCM3 1950 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 ZGRF1Q86YA3 2104 aa21.69■■□□□ 1.06
HMGA2-201ENST00000354636 FAM208BQ5VWN6 2430 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 ZNF814B7Z6K7 855 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 SMAD9O15198 467 aaKnown RBP21.68■■□□□ 1.06
HMGA2-201ENST00000354636 WDR1O75083 606 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 TSPAN19P0C672 248 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 DAPP51397 102 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 P2RY4P51582 365 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 FHL1Q13642 323 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 PON3Q15166 354 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 TRIP10Q15642 601 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 CD300LDQ6UXZ3 194 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 H1FNTQ75WM6 255 aaPredicted RBP21.68■■□□□ 1.06
HMGA2-201ENST00000354636 EME1Q96AY2 570 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 UCN2Q96RP3 112 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 OSBPL10Q9BXB5 764 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 SMURF2Q9HAU4 748 aa21.68■■□□□ 1.06
HMGA2-201ENST00000354636 IGHV3-15A0A0B4J1V0 119 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 AQP7P3A6NL99 342 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 FIGNL2A6NMB9 653 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 SYNGR4O95473 234 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 HIST1H2ABP04908 130 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 PTGER4P35408 488 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 RPS4XP62701 263 aaKnown RBP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 PPP2R2BQ00005 443 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 COX10Q12887 443 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 SF3B4Q15427 424 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 ACSF3Q4G176 576 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 PLXDC2Q6UX71 529 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 HIST3H2AQ7L7L0 130 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 DOLPP1Q86YN1 238 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 ADPRHL1Q8NDY3 354 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 OR13C2Q8NGS9 318 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 FNDC9Q8TBE3 224 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 HIST1H2ACQ93077 130 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 NAA11Q9BSU3 229 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 CHST11Q9NPF2 352 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 CLCF1Q9UBD9 225 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 MCTS1Q9ULC4 181 aaKnown RBP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 SIGLEC7Q9Y286 467 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 HIF3AQ9Y2N7 669 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 ZNF175Q9Y473 711 aa21.67■■□□□ 1.06
HMGA2-201ENST00000354636 RP1L1Q8IWN7 2480 aaPredicted RBP21.67■■□□□ 1.06
HMGA2-201ENST00000354636 PTP4A3O75365 173 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 GSTM3P21266 225 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 PMS2P3Q13401 168 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 IGFBP7Q16270 282 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 ANKDD1AQ495B1 522 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 LPCAT4Q643R3 524 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 KDM4DQ6B0I6 523 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 NANOGNBQ7Z5D8 188 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 CCDC103Q8IW40 242 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 CBR4Q8N4T8 237 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 OR51A7Q8NH64 312 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 ROBO4Q8WZ75 1007 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 TNFRSF13CQ96RJ3 184 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 TRIB1Q96RU8 372 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 ZNF556Q9HAH1 456 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 TAS2R5Q9NYW4 299 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 KIF17Q9P2E2 1029 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 SH3BGRL2Q9UJC5 107 aa21.66■■□□□ 1.06
HMGA2-201ENST00000354636 TRAV27A0A087WT01 109 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 UNC119BA6NIH7 251 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 KDM4EB2RXH2 506 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 MS4A18H0YCH9 400 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 PLPP3O14495 311 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 SOCS2O14508 198 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 EI24O14681 340 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 RAMP1O60894 148 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 HOXD4P09016 255 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 PEX2P28328 305 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 UQCRC1P31930 480 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 CASP6P55212 293 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 MRPL49Q13405 166 aaKnown RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 MS4A18Q3C1V0 323 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 ZBED5Q49AG3 693 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 RTL6Q6ICC9 239 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 KLHL17Q6TDP4 642 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 ZBTB49Q6ZSB9 765 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 DNAJC9Q8WXX5 260 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 SLC29A1Q99808 456 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 RBM4BQ9BQ04 359 aaKnown RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 RBM4Q9BWF3 364 aaKnown RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 PRRG4Q9BZD6 226 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 UCK2Q9BZX2 261 aa21.65■■□□□ 1.06
HMGA2-201ENST00000354636 TP63Q9H3D4 680 aaPredicted RBP21.65■■□□□ 1.06
HMGA2-201ENST00000354636 CALHM2Q9HA72 323 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms