RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 SUSD5O60279 629 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 GPR137BO60478 399 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 ARHGEF15O94989 841 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 ADIRFQ15847 76 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 PHLDA2Q53GA4 152 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 IL34Q6ZMJ4 242 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 LINC00346Q8IVM7 164 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF416Q9BWM5 594 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 C3P01024 1663 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 AGAP14A8MT82 685 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 CCSO14618 274 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 TNFSF4P23510 183 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 FCN2Q15485 313 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 LTB4RQ15722 352 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 SIAH3Q8IW03 269 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 RBMXL3Q8N7X1 1067 aaKnown RBP11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 FAM212BQ9NTI7 297 aaPredicted RBP11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 TAS2R46P59540 309 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 GHSRQ92847 366 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 PKMYT1Q99640 499 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 SEC22CQ9BRL7 303 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 EMC9Q9Y3B6 208 aa11.32□□□□□ -0.6
SEMA6A-202ENST00000343348 LPLP06858 475 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 GCAP28676 217 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 MRPS10P82664 201 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 WBP2NLQ6ICG8 309 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 NECTIN4Q96NY8 510 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 FN3KRPQ9HA64 309 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ATP1B3P54709 279 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 MFGE8Q08431 387 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 IRF4Q15306 451 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OLIG3Q7RTU3 272 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SCD5Q86SK9 330 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PLPP5Q8NEB5 264 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 GPR150Q8NGU9 434 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PPP1R35Q8TAP8 253 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ANKRD9Q96BM1 317 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OR5M11Q96RB7 305 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 MCTS1Q9ULC4 181 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ICMTO60725 284 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 IGHG1P01857 330 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 RAB40ALP0C0E4 278 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 CLEC2LP0C7M8 214 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ANXA7P20073 488 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 BCKDHBP21953 392 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 BLVRBP30043 206 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 P2RX1P51575 399 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 CLDN17P56750 224 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 RACK1P63244 317 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SF3B4Q15427 424 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 NECAP1Q8NC96 275 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OR10R2Q8NGX6 335 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 RAB40AQ8WXH6 277 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 INTS12Q96CB8 462 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ZNF582Q96NG8 517 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 GPR78Q96P69 363 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 ULBP2Q9BZM5 246 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 C11orf54Q9H0W9 315 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 C20orf85Q9H1P6 137 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 IL17CQ9P0M4 197 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 NAV1Q8NEY1 1877 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PHF1O43189 567 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 XRCC3O43542 346 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 HLA-DOBP13765 273 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 GPLD1P80108 840 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 EMC10Q5UCC4 262 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PRAMEF20Q5VT98 475 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 RTP4Q96DX8 246 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 TNFRSF13CQ96RJ3 184 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC2A11Q9BYW1 496 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SDK1Q7Z5N4 2213 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 G3V3Y1 287 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 P2RY10O00398 339 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 PKLRP30613 574 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 MPEG1Q2M385 716 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 COX20Q5RI15 118 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SMIM15Q7Z3B0 74 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC41A2Q96JW4 573 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 SLC45A1Q9Y2W3 748 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 KCNK2O95069 426 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 CEBPBP17676 345 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 RPE65Q16518 533 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 CDONQ4KMG0 1287 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 OR52I1Q8NGK6 324 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 REEP6Q96HR9 211 aa11.31□□□□□ -0.6
SEMA6A-202ENST00000343348 NTMT1Q9BV86 223 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms