RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 FLRT3Q9NZU0 649 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 CES1P1Q9UKY3 287 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 SIGLEC7Q9Y286 467 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 ARRDC5A6NEK1 342 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 TRABD2BA6NFA1 517 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 SYT5O00445 386 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 GMDSO60547 372 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 TNFP01375 233 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 NR0B1P51843 470 aaKnown RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 ZNF136P52737 540 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 PSMA6P60900 246 aaKnown RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 TRA2BP62995 288 aaKnown RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 HTRA4P83105 476 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 ZP2Q05996 745 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 GAB4Q2WGN9 574 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 SIGIRRQ6IA17 410 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 PAQR7Q86WK9 346 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 SAMD14Q8IZD0 417 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 SFXN5Q8TD22 340 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.53□□□□□ -0.56
LMX1A-202ENST00000342310 BMFQ96LC9 184 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 VDAC3Q9Y277 283 aa11.53□□□□□ -0.56
LMX1A-202ENST00000342310 C17orf105B2RV13 164 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 M0R233 179 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 SEMA4FO95754 770 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 AGR2O95994 175 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 APOC3P02656 99 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 GALEQ14376 348 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 ZIC1Q15915 447 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 EOGTQ5NDL2 527 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 MCATQ8IVS2 390 aaKnown RBP11.52□□□□□ -0.56
LMX1A-202ENST00000342310 PLPP7Q8NBV4 271 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 OR51D1Q8NGF3 324 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 CASTOR1Q8WTX7 329 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 ZNRF4Q8WWF5 429 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 C5orf34Q96MH7 638 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 PPP1R3EQ9H7J1 279 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 RXFP3Q9NSD7 469 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 GLTPQ9NZD2 209 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 SLCO1B1Q9Y6L6 691 aa11.52□□□□□ -0.56
LMX1A-202ENST00000342310 RIF1Q5UIP0 2472 aaKnown RBP11.52□□□□□ -0.56
LMX1A-202ENST00000342310 H3BML4 177 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 H3BUI4 141 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 CXCR1P25024 350 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ARRB1P49407 418 aaPredicted RBP11.52□□□□□ -0.57
LMX1A-202ENST00000342310 GFERP55789 205 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 KIAA1024LP59773 190 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 NFATC4Q14934 902 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 MEP1BQ16820 701 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 HDDC2Q7Z4H3 204 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 CMTM4Q8IZR5 234 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 METTL21AQ8WXB1 218 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 TMEM106AQ96A25 262 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 PELI1Q96FA3 418 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 NUDT22Q9BRQ3 303 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 TBL1XR1Q9BZK7 514 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ELL3Q9HB65 397 aaPredicted RBP11.52□□□□□ -0.57
LMX1A-202ENST00000342310 CMC2Q9NRP2 79 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ACAD8Q9UKU7 415 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 COPS3Q9UNS2 423 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 SLC22A7Q9Y694 548 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 DOCK7Q96N67 2140 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ROS1P08922 2347 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 WDFY4Q6ZS81 3184 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 SCDO00767 359 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 TFP02787 698 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 HPXP02790 462 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 PDGFAP04085 211 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 NGFRP08138 427 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 HLA-DMAP28067 261 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 CTHP32929 405 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 MELKQ14680 651 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 PCGF3Q3KNV8 242 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 TMEM92Q6UXU6 159 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 MED25Q71SY5 747 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 GALNTL5Q7Z4T8 443 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 POGLUT1Q8NBL1 392 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 S100A16Q96FQ6 103 aaKnown RBP11.52□□□□□ -0.57
LMX1A-202ENST00000342310 MNTQ99583 582 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ARHGDIGQ99819 225 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 DPYSL5Q9BPU6 564 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ALG12Q9BV10 488 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 PCDHGB7Q9Y5F8 929 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 DENND4CQ5VZ89 1909 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 TTC28Q96AY4 2481 aa11.52□□□□□ -0.57
LMX1A-202ENST00000342310 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 TMIGD3P0DMS9 266 aaPredicted RBP11.51□□□□□ -0.57
LMX1A-202ENST00000342310 GTF2F2P13984 249 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 LCN1P31025 176 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 UBXN2BQ14CS0 331 aa11.51□□□□□ -0.57
LMX1A-202ENST00000342310 TMEM44Q2T9K0 475 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms