RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 TPRP12270 2363 aaKnown RBP14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 TRAV18A0A075B6X5 111 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 ZAR1LA6NP61 321 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RAB6AP20340 208 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PTAFRP25105 342 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 CD34P28906 385 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RGS19P49795 217 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 GGTA1PQ4G0N0 100 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 TMEM71Q6P5X7 295 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 LURAP1LQ8IV03 231 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 RAB3CQ96E17 227 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 SLC25A32Q9H2D1 315 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 BABAM2Q9NXR7 383 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 PPT2Q9UMR5 302 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 HS3ST2Q9Y278 367 aa14.92□□□□□ -0.02
NPHP3-201ENST00000337331 A0A0D9SG52 128 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 LDB3O75112 727 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 HEXBP07686 556 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 GLP1RP43220 463 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 CLDN2P57739 230 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 PRDX1Q06830 199 aaKnown RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 LRIF1Q5T3J3 769 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 C10orf111Q8N326 155 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 OR52N1Q8NH53 320 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 ZC3HAV1LQ96H79 300 aaKnown RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SAMD11Q96NU1 681 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 LMF1Q96S06 567 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 MICU1Q9BPX6 476 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 OR52D1Q9H346 318 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 NME7Q9Y5B8 376 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 HPXP02790 462 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SFTPBP07988 381 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 FUT1P19526 365 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 OR10A3P58181 314 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 CTAG1AP78358 180 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 BATFQ16520 125 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SYT14P1Q58G82 188 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 C3orf33Q6P1S2 294 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 LILRA3Q8N6C8 439 aaPredicted RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SDR9C7Q8NEX9 313 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 OR14A16Q8NHC5 309 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SLC38A5Q8WUX1 472 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 CDS1Q92903 461 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 KCTD12Q96CX2 325 aaKnown RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SHARPINQ9H0F6 387 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 FAM221BA6H8Z2 402 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 MCRIP1C9JLW8 97 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 NDUFS6O75380 124 aaKnown RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 CEBPBP17676 345 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 NSDHLQ15738 373 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 RAB30Q15771 203 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 MANEAQ5SRI9 462 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 SYT9Q86SS6 491 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 VRK2Q86Y07 508 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF440Q8IYI8 595 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 BPIFA2Q96DR5 249 aa14.91□□□□□ -0.02
NPHP3-201ENST00000337331 C19orf25Q9UFG5 118 aaPredicted RBP14.91□□□□□ -0.02
NPHP3-201ENST00000337331 GGT3PA6NGU5 568 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 CLUP10909 449 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 GSG1Q2KHT4 349 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 COX20Q5RI15 118 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 CYB5R2Q6BCY4 276 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SLCO4C1Q6ZQN7 724 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 DEFB126Q9BYW3 111 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SLC25A18Q9H1K4 315 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 ZFP64Q9NPA5 681 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 ASB6Q9NWX5 421 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 APBB3O95704 486 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 RNF224P0DH78 156 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 RFC3P40938 356 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 CCR9P51686 369 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 CLRN1P58418 232 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SNRPGP62308 76 aaKnown RBP14.9□□□□□ -0.02
NPHP3-201ENST00000337331 NKX6-1P78426 367 aaPredicted RBP14.9□□□□□ -0.02
NPHP3-201ENST00000337331 KIAA0141Q14154 515 aaPredicted RBP14.9□□□□□ -0.02
NPHP3-201ENST00000337331 MPEG1Q2M385 716 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 OVCH2Q7RTZ1 564 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 OR52B4Q8NGK2 314 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 ELP5Q8TE02 316 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 MEGF10Q96KG7 1140 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 APOOQ9BUR5 198 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SUCNR1Q9BXA5 334 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 ZNF701Q9NV72 531 aaPredicted RBP14.9□□□□□ -0.02
NPHP3-201ENST00000337331 GHRLQ9UBU3 117 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 TAPBPO15533 448 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 HSPA12AO43301 675 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 RAD1O60671 282 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 EIF3GO75821 320 aaKnown RBP eCLIP14.9□□□□□ -0.02
NPHP3-201ENST00000337331 IFNA10P01566 189 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 IFNGR1P15260 489 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 PTGFRP43088 359 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 FAM27D1Q5T7N8 215 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 FCRLAQ7L513 359 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SERINC2Q96SA4 455 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 SULT4A1Q9BR01 284 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 ANKRD36CQ5JPF3 1778 aa14.9□□□□□ -0.02
NPHP3-201ENST00000337331 MFSD2BA6NFX1 497 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 LANCL1O43813 399 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms