RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 TRIM61Q5EBN2 209 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 LYSMD2Q8IV50 215 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SAP25Q8TEE9 199 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ASB15Q8WXK1 588 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 TAAR8Q969N4 342 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ADGRL4Q9HBW9 690 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 NANSQ9NR45 359 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 COPS3Q9UNS2 423 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 EXOSC1Q9Y3B2 195 aaKnown RBP11.47□□□□□ -0.57
LIMK1-201ENST00000336180 CFAP47Q6ZTR5 3102 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 CDKN2AP42771 156 aaKnown RBP11.47□□□□□ -0.57
LIMK1-201ENST00000336180 PPP5CP53041 499 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 RUNX1T1Q06455 604 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ELAVL1Q15717 326 aaKnown RBP11.47□□□□□ -0.57
LIMK1-201ENST00000336180 BAK1Q16611 211 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 PMS2CLQ68D20 193 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 RNF113BQ8IZP6 322 aaKnown RBP11.47□□□□□ -0.57
LIMK1-201ENST00000336180 CADM3Q8N126 398 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 NEIL3Q8TAT5 605 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 S100ZQ8WXG8 99 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 KCTD7Q96MP8 289 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 PDCD1LG2Q9BQ51 273 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 ZMIZ1Q9ULJ6 1067 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 SLC35A3Q9Y2D2 325 aa11.47□□□□□ -0.57
LIMK1-201ENST00000336180 TMEM265A0A087WTH1 108 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 B4DXG7 233 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 HPGDSO60760 199 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 NDUFB2O95178 105 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 SBK2P0C263 348 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 SLC2A2P11168 524 aaPredicted RBP11.46□□□□□ -0.57
LIMK1-201ENST00000336180 PEPDP12955 493 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 RORCP51449 518 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 EPHA4P54764 986 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 ZNF85Q03923 595 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 SLC29A4Q7RTT9 530 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 NR2C2APQ86WQ0 139 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 CHPT1Q8WUD6 406 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 NR4A3Q92570 626 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 HOXB13Q92826 284 aaPredicted RBP11.46□□□□□ -0.57
LIMK1-201ENST00000336180 EDAQ92838 391 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 DIRAS2Q96HU8 199 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 SLC46A1Q96NT5 459 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 MED11Q9P086 117 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 GNG8Q9UK08 70 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 PCDHGB6Q9Y5F9 930 aa11.46□□□□□ -0.57
LIMK1-201ENST00000336180 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.58
LIMK1-201ENST00000336180 IL33O95760 270 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 NAGAP17050 411 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 CTRB1P17538 263 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 GPLD1P80108 840 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 NR0B2Q15466 257 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 CTRB2Q6GPI1 263 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 MTFR2Q6P444 385 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM71Q6P5X7 295 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 FAM131AQ6UXB0 335 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 CELF2-AS1Q8N7Q2 184 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 ZNF485Q8NCK3 441 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 IFI44Q8TCB0 444 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 HSD17B8Q92506 261 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 SDHCQ99643 169 aaPredicted RBP11.46□□□□□ -0.58
LIMK1-201ENST00000336180 C14orf105Q9NVL8 296 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 PILRBQ9UKJ0 227 aa11.46□□□□□ -0.58
LIMK1-201ENST00000336180 TP53BP1Q12888 1972 aaPredicted RBP11.46□□□□□ -0.58
LIMK1-201ENST00000336180 TRBV11-1A0A0K0K1C0 115 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 PRR32B1ATL7 298 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 H3BML4 177 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 UPK1BO75841 260 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 GRK6P43250 576 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 MELKQ14680 651 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 GLCCI1Q86VQ1 547 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ITPKCQ96DU7 683 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 NEDD4LQ96PU5 975 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 BCL7BQ9BQE9 202 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 MIXL1Q9H2W2 232 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ACOXLQ9NUZ1 547 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 PLEKHB1Q9UF11 243 aaPredicted RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 A0A1B0GTQ1 180 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM129A0AVI4 362 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 EFCAB7A8K855 629 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 IDNKQ5T6J7 187 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 MAML2Q8IZL2 1156 aaPredicted RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 OR5W2Q8NH69 310 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 SLC22A8Q8TCC7 542 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 DAZLQ92904 295 aaKnown RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 LPAR4Q99677 370 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 SLC30A2Q9BRI3 323 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 POU2F3Q9UKI9 436 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 TMEM5Q9Y2B1 443 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 ARHGEF9O43307 516 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 FMO6PO60774 539 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 OR7A10O76100 309 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 CFL1P23528 166 aaKnown RBP11.45□□□□□ -0.58
LIMK1-201ENST00000336180 GPR143P51810 404 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 CTBP2P56545 445 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 SLC25A30Q5SVS4 291 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 PRAMEF20Q5VT98 475 aa11.45□□□□□ -0.58
LIMK1-201ENST00000336180 PAPD4Q6PIY7 484 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms