RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ZNF511Q8NB15 262 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 DNAAF1Q8NEP3 725 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SMIM4Q8WVI0 70 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CLIP3Q96DZ5 547 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NRIP3Q9NQ35 241 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ABRACLQ9P1F3 81 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ICAM5Q9UMF0 924 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 PPIEQ9UNP9 301 aaKnown RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 RP1P56715 2156 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 URADA6NGE7 173 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 I3L521 148 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 RPS27P42677 84 aaKnown RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 PLA2G7Q13093 441 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CDONQ4KMG0 1287 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NLRC3Q7RTR2 1065 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SLC22A18Q96BI1 424 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CTHRC1Q96CG8 243 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SORCS2Q96PQ0 1159 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 LMF1Q96S06 567 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 DDOQ99489 341 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 C1QTNF6Q9BXI9 259 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 HRASLSQ9HDD0 168 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 FAM60AQ9NP50 221 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 LRIT1Q9P2V4 623 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ENTPD2Q9Y5L3 495 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 TNFSF14O43557 240 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NKX2-2O95096 273 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NDUFB2O95178 105 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 OR2T7P0C7T2 308 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 TMIGD3P0DMS9 266 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SOX2P48431 317 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CCR9P51686 369 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
VPS33B-201ENST00000333371 PITPNAQ00169 270 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 PON3Q15166 354 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ODF4Q2M2E3 257 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 OR2T27Q8NH04 317 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 ASB12Q8WXK4 309 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 TTC9Q92623 222 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 LIN7BQ9HAP6 207 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 SERTAD3Q9UJW9 196 aa11.28□□□□□ -0.6
VPS33B-201ENST00000333371 CFAP54Q96N23 3096 aa11.27□□□□□ -0.6
VPS33B-201ENST00000333371 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.6
VPS33B-201ENST00000333371 TCRBV21S2A2A0A5A6 115 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 A6NCN8 305 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 GALR3O60755 368 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 ZFPL1O95159 310 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 SERPINA3P01011 423 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 TYRP1P17643 537 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 SPI1P17947 270 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 HNRNPA2B1P22626 353 aaKnown RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RAD52P43351 418 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 SNTA1Q13424 505 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 UBE2NLQ5JXB2 153 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 APOOLQ6UXV4 268 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 NPSR1Q6W5P4 371 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 FTMTQ8N4E7 242 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 CSNK1A1LQ8N752 337 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 OR4C3Q8NH37 302 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 OR56B4Q8NH76 319 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RELTQ969Z4 430 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RBP7Q96R05 134 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 ZCCHC4Q9H5U6 513 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 CA10Q9NS85 328 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 HRASLS2Q9NWW9 162 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 HCN3Q9P1Z3 774 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 KLHDC2Q9Y2U9 406 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 H7C1C5 153 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 OR8G3PP0DMU2 310 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 S1PR1P21453 382 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 DCTDP32321 178 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 BLVRAP53004 296 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 LCN6P62502 163 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 MAT1AQ00266 395 aaKnown RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 SLC25A25Q6KCM7 469 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 KANSL1Q7Z3B3 1105 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 SLC2A12Q8TD20 617 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 Q96M85 177 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 ZNF436Q9C0F3 470 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-201ENST00000333371 RPS6KB2Q9UBS0 482 aa11.27□□□□□ -0.61
VPS33B-201ENST00000333371 LINC00862A6NCI5 91 aa11.26□□□□□ -0.61
VPS33B-201ENST00000333371 IFITM5A6NNB3 132 aa11.26□□□□□ -0.61
VPS33B-201ENST00000333371 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
VPS33B-201ENST00000333371 GMFGO60234 142 aa11.26□□□□□ -0.61
VPS33B-201ENST00000333371 PEX14O75381 377 aa11.26□□□□□ -0.61
VPS33B-201ENST00000333371 GATBO75879 557 aaKnown RBP11.26□□□□□ -0.61
VPS33B-201ENST00000333371 HOXC4P09017 264 aaPredicted RBP11.26□□□□□ -0.61
VPS33B-201ENST00000333371 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms