RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DTX4Q9Y2E6 619 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 HRKO00198 91 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 PDCD5O14737 125 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF749O43361 778 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 PPM1BO75688 479 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 TYRP1P17643 537 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 PPP1CAP62136 330 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 ZSWIM7Q19AV6 140 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 COL28A1Q2UY09 1125 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 NDUFAF6Q330K2 333 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 GXYLT1Q4G148 440 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 FAM199XQ6PEV8 388 aaPredicted RBP14.06□□□□□ -0.16
BRCC3-201ENST00000330045 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 ZPLD1Q8TCW7 415 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
BRCC3-201ENST00000330045 VSTM2LQ96N03 204 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 DDOQ99489 341 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 GFI1Q99684 422 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 SPRTNQ9H040 489 aaPredicted RBP14.06□□□□□ -0.16
BRCC3-201ENST00000330045 HEXA-AS1Q9H8Q6 139 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 DLL4Q9NR61 685 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 NKIRAS2Q9NYR9 191 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 MRPL15Q9P015 296 aaKnown RBP14.06□□□□□ -0.16
BRCC3-201ENST00000330045 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF337Q9Y3M9 751 aa14.06□□□□□ -0.16
BRCC3-201ENST00000330045 FAM221BA6H8Z2 402 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ACOD1A6NK06 481 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 IFITM5A6NNB3 132 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 IDSB3KWA1 339 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 NPIPB9F8W1W9 429 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ARPC3O15145 178 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 DNASE1P24855 282 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 HSF2Q03933 536 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 FAM69AQ5T7M9 428 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SFRP4Q6FHJ7 346 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 Q6ZS52 159 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SFTPA2Q8IWL1 248 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 CCDC28AQ8IWP9 274 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF433Q8N7K0 673 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 OR6C4Q8NGE1 309 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 RASD2Q96D21 266 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SPACA7Q96KW9 195 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 MRGPRX1Q96LB2 322 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SORCS2Q96PQ0 1159 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SLC25A18Q9H1K4 315 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ANKRD10Q9NXR5 420 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ZNF281Q9Y2X9 895 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 EFCAB7A8K855 629 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 AIPO00170 330 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 PSMD9O00233 223 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 GMDSO60547 372 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 PEX14O75381 377 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 CSTAP01040 98 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 HPXP02790 462 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 CTSBP07858 339 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 NUDT1P36639 197 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 CCR9P51686 369 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 ERVK-25P63136 954 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SRSF5Q13243 272 aaKnown RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 DEFB110Q30KQ9 67 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 LGALSLQ3ZCW2 172 aaPredicted RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 KIAA1324Q6UXG2 1013 aaKnown RBP14.05□□□□□ -0.16
BRCC3-201ENST00000330045 NPSR1Q6W5P4 371 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 CDH24Q86UP0 819 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 FRMD1Q8N878 549 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 G6PC3Q9BUM1 346 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 NMNAT2Q9BZQ4 307 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 PLEKHA1Q9HB21 404 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 HRASLSQ9HDD0 168 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 Q9N2J8 555 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 FAM60AQ9NP50 221 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 SCP2D1Q9UJQ7 156 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 RCE1Q9Y256 329 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 LRP4O75096 1905 aa14.05□□□□□ -0.16
BRCC3-201ENST00000330045 LINC00862A6NCI5 91 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 OR7A10O76100 309 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 YPEL5P62699 121 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 STX4Q12846 297 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 NNATQ16517 81 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 Q6ZSR6 202 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 RFPL4BQ6ZWI9 263 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 FCRLAQ7L513 359 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 SLC35F3Q8IY50 421 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 RPS4Y2Q8TD47 263 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 GCDHQ92947 438 aaPredicted RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 LRIT1Q9P2V4 623 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 TGFBR3LH3BV60 316 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 GABARAPH6UMI1 98 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 KHNYNO15037 678 aaKnown RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 SERPINI2O75830 405 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 GLCEO94923 617 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 ECDO95905 644 aaPredicted RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 DPP4P27487 766 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 GRPRP30550 384 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 MAGEB1P43366 347 aa14.04□□□□□ -0.16
BRCC3-201ENST00000330045 PSMD4P55036 377 aaKnown RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 NANOS3P60323 173 aaKnown RBP14.04□□□□□ -0.16
BRCC3-201ENST00000330045 UBE2IP63279 158 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms