RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 UQCRC1P31930 480 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 GDNFP39905 211 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 DIO1P49895 249 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 GPR143P51810 404 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 NUBP2Q9Y5Y2 271 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 PRUNE2Q8WUY3 3088 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 TMEM72A0PK05 275 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 MEN1O00255 615 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 SRMP19623 302 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 GRK6P43250 576 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 RPL22L1Q6P5R6 122 aaKnown RBP12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 NPEPL1Q8NDH3 523 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 FAM131CQ96AQ9 280 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 OR10A4Q9H209 315 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 GHITMQ9H3K2 345 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 NRIP3Q9NQ35 241 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 ABRACLQ9P1F3 81 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 HS3ST3A1Q9Y663 406 aa12.86□□□□□ -0.35
ATP2C1-201ENST00000328560 A0A1B0GTH9 108 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 A0A1W2PQ72 361 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 CLDN4O14493 209 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 OGG1O15527 345 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 NOS1APO75052 506 aaPredicted RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 RPS11P62280 158 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 FAAP20Q6NZ36 180 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 JAZF1Q86VZ6 243 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 POMGNT2Q8NAT1 580 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 C17orf50Q8WW18 174 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 TOE1Q96GM8 510 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ADAD1Q96M93 576 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 MAP3K3Q99759 626 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 POLE3Q9NRF9 147 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SOHLH2Q9NX45 425 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SERTAD3Q9UJW9 196 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ZNF879B4DU55 563 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 KHDRBS3O75525 346 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 GABRG2P18507 467 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 CENPAP49450 140 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 FGFBP1Q14512 234 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ST3GAL2Q16842 350 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 PRR22Q8IZ63 422 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 BCORP1Q8N888 145 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 DNAAF1Q8NEP3 725 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 OR51Q1Q8NH59 317 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 KLHDC7BQ96G42 594 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SCMH1Q96GD3 660 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 FOXN4Q96NZ1 517 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ALG12Q9BV10 488 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 FKRPQ9H9S5 495 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SLCO1B1Q9Y6L6 691 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 TRIOO75962 3097 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 TRAV1-2A0A0B4J238 106 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 IGFBP4P22692 258 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 NANOS3P60323 173 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 CTXN1P60606 82 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 UBE2IP63279 158 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 C19orf47Q8N9M1 422 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 OR11H4Q8NGC9 324 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 C1orf216Q8TAB5 229 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 ZDHHC1Q8WTX9 485 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 OR10A5Q9H207 317 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SYNDIG1Q9H7V2 258 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 PNO1Q9NRX1 252 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 SPATA2Q9UM82 520 aa12.85□□□□□ -0.35
ATP2C1-201ENST00000328560 PIN1P1O15428 100 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 GMDSO60547 372 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 ZFPL1O95159 310 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 UCHL1P09936 223 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CT45A8P0DMV1 189 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CT45A9P0DMV2 189 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CDKN2AP42771 156 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 MMP15P51511 669 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CT45A2Q5DJT8 189 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 CBLN3Q6UW01 205 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 DPY19L2P2Q6ZN68 376 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 OR52I2Q8NH67 350 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 OR14A16Q8NHC5 309 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 ELF4Q99607 663 aaPredicted RBP12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 G6PC3Q9BUM1 346 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 SEMA6CQ9H3T2 930 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 NANSQ9NR45 359 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 RXFP3Q9NSD7 469 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 EIF3KQ9UBQ5 218 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
ATP2C1-201ENST00000328560 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms