RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMPPEQ6ZT21 453 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 TMPRSS11FQ6ZWK6 438 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 HIST3H2AQ7L7L0 130 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 FAR1Q8WVX9 515 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 OSTF1Q92882 214 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 HIST1H2ACQ93077 130 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 MBOAT4Q96T53 435 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 DGCR6LQ9BY27 220 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 VCX3BQ9H321 246 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 MCCC2Q9HCC0 563 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 TBC1D23Q9NUY8 699 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 REV1Q9UBZ9 1251 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 SIGLEC7Q9Y286 467 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 TMEM5Q9Y2B1 443 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 POFUT2Q9Y2G5 429 aa13.81□□□□□ -0.2
PDLIM5-202ENST00000318007 GJE1A6NN92 205 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 RNF13O43567 381 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 HLA-DOBP13765 273 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF708P17019 499 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 PON3Q15166 354 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF620Q6ZNG0 422 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 MAMDC2Q7Z304 686 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 LINC00471Q8N535 108 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ADAM18Q9Y3Q7 739 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 AP4B1Q9Y6B7 739 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 RP1L1Q8IWN7 2480 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 OR2T1O43869 369 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 IGHG3P01860 377 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 TP53P04637 393 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 RPL18Q07020 188 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 NPRL3Q12980 569 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 FHL1Q13642 323 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ZBED5Q49AG3 693 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 SLC35F1Q5T1Q4 408 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF585AQ6P3V2 769 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ESPNLQ6ZVH7 1005 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 MEIOBQ8N635 442 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 MIB2Q96AX9 1013 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 GPR137Q96N19 417 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 ASPNQ9BXN1 380 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 PNPLA3Q9NST1 481 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 USE1Q9NZ43 259 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 AASSQ9UDR5 926 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 HDGFL3Q9Y3E1 203 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 COL6A6A6NMZ7 2263 aa13.8□□□□□ -0.2
PDLIM5-202ENST00000318007 OR6A2O95222 327 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 PPP1R3DO95685 299 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 TPOP07202 933 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 GNAO1P09471 354 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 OSMP13725 252 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 RAD23AP54725 363 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 GK3PQ14409 553 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 PTGES3Q15185 160 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 INAQ16352 499 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 ALG10Q5BKT4 473 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 TMEM225Q6GV28 225 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 FGD2Q7Z6J4 655 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 MFSD8Q8NHS3 518 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 FNDC9Q8TBE3 224 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 TEX47Q8TBZ9 253 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 WDYHV1Q96HA8 205 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 IFT27Q9BW83 186 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 TSSK6Q9BXA6 273 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF229Q9UJW7 825 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 CLEC4AQ9UMR7 237 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 CFAP46Q8IYW2 2715 aa13.79□□□□□ -0.2
PDLIM5-202ENST00000318007 HCN1O60741 890 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ACTL6AO96019 429 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 HPRP00739 348 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 PRB1P04280 392 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 GSTM3P21266 225 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ERVK-25P63136 954 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 POU3F1Q03052 451 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 MELKQ14680 651 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 CHMP1BQ7LBR1 199 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ABHD3Q8WU67 409 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 TUBA1CQ9BQE3 449 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 KATNB1Q9BVA0 655 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 POTEKPQ9BYX7 375 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 TAS2R5Q9NYW4 299 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 KIAA1549Q9HCM3 1950 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 MT-ATP6P00846 226 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 MAP2K6P52564 334 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 CRISP1P54107 249 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 CSNK2A1P68400 391 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 RASSF6Q6ZTQ3 369 aa13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-202ENST00000318007 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms