RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 FZD3Q9NPG1 666 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CYSLTR2Q9NS75 346 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 DEC1Q9P2X7 70 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ING1Q9UK53 422 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SLC6A5Q9Y345 797 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 THSD7BQ9C0I4 1608 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CCDC163A0A0D9SF12 145 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TRAPPC13A5PLN9 417 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 POM121BA6NF01 834 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 K7ESM1 405 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SHOXO15266 292 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SELENOFO60613 162 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 GCM2O75603 506 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 HTR3BO95264 441 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 LDOC1O95751 146 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 KNG1P01042 644 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 F13BP05160 661 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 UBBP0CG47 229 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 UBCP0CG48 685 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TFPIP10646 304 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CDK2P24941 298 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CMPK1P30085 196 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 HTR1FP30939 366 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 KCNJ3P48549 501 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SNRPEP62304 92 aaKnown RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 RAB33AQ14088 237 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 AGERQ15109 404 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 RPE65Q16518 533 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 GSG1Q2KHT4 349 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SEZ6L2Q6UXD5 910 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 GDF7Q7Z4P5 450 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 AMER3Q8N944 861 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 DUSP18Q8NEJ0 188 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 OR10Z1Q8NGY1 313 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 OR5AK2Q8NH90 309 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 TM4SF18Q96CE8 201 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 NEURL3Q96EH8 262 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 SENP5Q96HI0 755 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 MS4A3Q96HJ5 214 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 C5orf34Q96MH7 638 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF75AQ96N20 296 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 VN1R3Q9BXE9 311 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ELF5Q9UKW6 265 aaPredicted RBP6.97□□□□□ -1.29
CDHR3-201ENST00000317716 PRELID3BQ9Y3B1 194 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ADAM18Q9Y3Q7 739 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF175Q9Y473 711 aa6.97□□□□□ -1.29
CDHR3-201ENST00000317716 CACNA1EQ15878 2313 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 TRBV23-1A0A0A0MS06 115 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF878C9JN71 531 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 KCNJ13O60928 360 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 SERPINA5P05154 406 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 HOXB5P09067 269 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ARL4DP49703 201 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 IL13RA1P78552 427 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 SPOCK1Q08629 439 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ENPP2Q13822 863 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 HLXQ14774 488 aaPredicted RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 PUS10Q3MIT2 529 aaKnown RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 AVPI1Q5T686 147 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 OR6V1Q8N148 313 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 MRPL43Q8N983 215 aaKnown RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ACOT4Q8N9L9 421 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 BPIFCQ8NFQ6 507 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 PPP1R14AQ96A00 147 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ZBTB8AQ96BR9 441 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 HCAR1Q9BXC0 346 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 PPP1R3EQ9H7J1 279 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 IL21RQ9HBE5 538 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 CA10Q9NS85 328 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ACSS1Q9NUB1 689 aaPredicted RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 PARPBPQ9NWS1 579 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ZNF223Q9UK11 482 aaPredicted RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 GPR55Q9Y2T6 319 aaPredicted RBP6.96□□□□□ -1.29
CDHR3-201ENST00000317716 ATG4BQ9Y4P1 393 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.29
CDHR3-201ENST00000317716 CHD9Q3L8U1 2897 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 RPS10-NUDT3A0A1W2PQS6 291 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SHISA3A0PJX4 238 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 UGDHO60701 494 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 JMJD7P0C870 316 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 CTSAP10619 480 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ZP3P21754 424 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 RAB2AP61019 212 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 FOXK2Q01167 660 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 FLI1Q01543 452 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 POU4F2Q12837 409 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 CBFBQ13951 182 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 MRPL2Q5T653 305 aaKnown RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 HLA-DQA1Q5Y7H0 255 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 B3GNTL1Q67FW5 361 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF529Q6P280 563 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM71Q6P5X7 295 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 FAM111BQ6SJ93 734 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM205Q6UW68 189 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 PM20D2Q8IYS1 436 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms