RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ENPP2Q13822 863 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 KIR2DS3Q14952 304 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 LINC00303Q3SY05 128 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 FCRL6Q6DN72 434 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 DNM1P46Q6ZS02 220 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.51■□□□□ 0.39
RTN4-201ENST00000317610 CAMKVQ8NCB2 501 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 SP7Q8TDD2 431 aaPredicted RBP17.51■□□□□ 0.39
RTN4-201ENST00000317610 PIGKQ92643 395 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 HAVCR1Q96D42 359 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 ELMOD3Q96FG2 381 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 S100A16Q96FQ6 103 aaKnown RBP17.51■□□□□ 0.39
RTN4-201ENST00000317610 SLC17A9Q9BYT1 436 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 OR5V1Q9UGF6 321 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 PRELID1Q9Y255 219 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 KCNMB2Q9Y691 235 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 TICRRQ7Z2Z1 1910 aa17.51■□□□□ 0.39
RTN4-201ENST00000317610 MFSD2BA6NFX1 497 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 ZNF860A6NHJ4 632 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 CYR61O00622 381 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 TPPPO94811 219 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 ZNF684Q5T5D7 378 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 KIAA1324Q6UXG2 1013 aaKnown RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 DPY19L2P2Q6ZN68 376 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SLC35F3Q8IY50 421 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SHISA5Q8N114 240 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SYNPRQ8TBG9 265 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 NSMAFQ92636 917 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 OR2M4Q96R27 311 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SRMSQ9H3Y6 488 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 GPN1Q9HCN4 374 aaPredicted RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 MRPS2Q9Y399 296 aaKnown RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 A0A1W2PQU0 124 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 MCRIP1C9JLW8 97 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 TRIM77I1YAP6 450 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 L7N2F9 121 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 ACOT7O00154 380 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 CREBL2O60519 120 aaPredicted RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 NDUFB6O95139 128 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 LDOC1O95751 146 aaPredicted RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 SPI1P17947 270 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 PTGS2P35354 604 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 NANOS3P60323 173 aaKnown RBP17.5■□□□□ 0.39
RTN4-201ENST00000317610 HTR4Q13639 388 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 ISXQ2M1V0 245 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 TMEM69Q5SWH9 247 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 STPG1Q5TH74 334 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SERPINA12Q8IW75 414 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 LHFPL5Q8TAF8 219 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 C15orf40Q8WUR7 153 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 SGTBQ96EQ0 304 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 HSPA12BQ96MM6 686 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 COQ3Q9NZJ6 369 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 PCDHGA5Q9Y5G8 931 aa17.5■□□□□ 0.39
RTN4-201ENST00000317610 ARPC3O15145 178 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 NFYAP23511 347 aaPredicted RBP17.49■□□□□ 0.39
RTN4-201ENST00000317610 PSMA6P60900 246 aaKnown RBP17.49■□□□□ 0.39
RTN4-201ENST00000317610 IL10RAQ13651 578 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ULK3Q6PHR2 472 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 MEIOBQ8N635 442 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 MOSPD2Q8NHP6 518 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 MIB2Q96AX9 1013 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 CRISPLD2Q9H0B8 497 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 SDHAF2Q9NX18 166 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 TAS2R10Q9NYW0 307 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ZNF69Q9UC07 566 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ADAM18Q9Y3Q7 739 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ETV7Q9Y603 341 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 PRSS38A1L453 326 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ZFPL1O95159 310 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 CBX7O95931 251 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 GJA4P35212 333 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 RGS7BPQ6MZT1 257 aaPredicted RBP17.49■□□□□ 0.39
RTN4-201ENST00000317610 PSRC1Q6PGN9 363 aaPredicted RBP17.49■□□□□ 0.39
RTN4-201ENST00000317610 TMEFF1Q8IYR6 380 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 ZNF433Q8N7K0 673 aaPredicted RBP17.49■□□□□ 0.39
RTN4-201ENST00000317610 KLHL15Q96M94 604 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 SPACA6W5XKT8 324 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 LAMA3Q16787 3333 aa17.49■□□□□ 0.39
RTN4-201ENST00000317610 OR6C68A6NDL8 312 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 IDSB3KWA1 339 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 B3GALNT1O75752 331 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 ANXA7P20073 488 aaKnown RBP17.48■□□□□ 0.39
RTN4-201ENST00000317610 AK4P27144 223 aaPredicted RBP17.48■□□□□ 0.39
RTN4-201ENST00000317610 CLDN12P56749 244 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 FIGLAQ6QHK4 219 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 KIRREL2Q6UWL6 708 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 PRSS41Q7RTY9 318 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 C1orf216Q8TAB5 229 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 NMNAT3Q96T66 252 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 TRPV4Q9HBA0 871 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 MKKSQ9NPJ1 570 aaPredicted RBP17.48■□□□□ 0.39
RTN4-201ENST00000317610 SCML1Q9UN30 329 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 PRR32B1ATL7 298 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 CDK2P24941 298 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 CALCRP30988 508 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 DCTDP32321 178 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 RPS15P62841 145 aaKnown RBP17.48■□□□□ 0.39
RTN4-201ENST00000317610 STX4Q12846 297 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 B3GNTL1Q67FW5 361 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms