RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 GGTLC2Q14390 218 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 TCEAL6Q6IPX3 200 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 TCEAL3Q969E4 200 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 MROQ9BYG7 248 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 TRIM36Q9NQ86 728 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 PLEKHB1Q9UF11 243 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-201ENST00000315286 ZNF229Q9UJW7 825 aa16.68■□□□□ 0.26
CCDC43-201ENST00000315286 CD8B2A6NJW9 211 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 RGS5O15539 181 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 UPK1BO75841 260 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 CD8BP10966 210 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 NAA10P41227 235 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-201ENST00000315286 PSMD7P51665 324 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 RAB15P59190 212 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 LGALS3BPQ08380 585 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 TRA2AQ13595 282 aaKnown RBP eCLIP16.67■□□□□ 0.26
CCDC43-201ENST00000315286 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 LEG1Q6P5S2 330 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 TMEM91Q6ZNR0 172 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 NANOGNBQ7Z5D8 188 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 MARCH9Q86YJ5 346 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 CNN2Q99439 309 aaKnown RBP16.67■□□□□ 0.26
CCDC43-201ENST00000315286 COQ7Q99807 217 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 FKRPQ9H9S5 495 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 ABCB10Q9NRK6 738 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 RXFP3Q9NSD7 469 aa16.67■□□□□ 0.26
CCDC43-201ENST00000315286 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TMED7-TICAM2A0A0A6YYA0 188 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 IQCMA0A1B0GVH7 501 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 DVL2O14641 736 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TBX1O43435 398 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 PFDN1O60925 122 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 BGLAPP02818 100 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 HIST1H2ABP04908 130 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 APEHP13798 732 aaKnown RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 POLR2HP52434 150 aaKnown RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 OXA1LQ15070 435 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SPANXN2Q5MJ10 180 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 HIST3H2AQ7L7L0 130 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 VASH1Q7L8A9 365 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 ADGRG3Q86Y34 549 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 POMGNT2Q8NAT1 580 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 LSM14AQ8ND56 463 aaKnown RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 HIST1H2ACQ93077 130 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 HGDQ93099 445 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 PMEPA1Q969W9 287 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 CEP19Q96LK0 163 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TTTY10Q9BZA0 68 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TAS2R10Q9NYW0 307 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SLC6A5Q9Y345 797 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TMED7Q9Y3B3 224 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 B4DXG7 233 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 MAGEB4O15481 346 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SUSD5O60279 629 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SLC25A12O75746 678 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 OR2T7P0C7T2 308 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SDHAP31040 664 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 CAV3P56539 151 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 E2F1Q01094 437 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 TRIM16LQ309B1 348 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 LCN1P1Q5VSP4 162 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 ZBTB44Q8NCP5 570 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 OR5L2Q8NGL0 311 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 OR2T27Q8NH04 317 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 OR8K3Q8NH51 312 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 PTDSS2Q9BVG9 487 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 C19orf25Q9UFG5 118 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-201ENST00000315286 NOX1Q9Y5S8 564 aa16.66■□□□□ 0.26
CCDC43-201ENST00000315286 SHISA3A0PJX4 238 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TMEM72A0PK05 275 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 FAM171A2A8MVW0 826 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GTF2E2P29084 291 aaKnown RBP16.65■□□□□ 0.26
CCDC43-201ENST00000315286 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SLC35D3Q5M8T2 416 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 ARL9Q6T311 187 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 LYPD4Q6UWN0 246 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 RPTNQ6XPR3 784 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GRINAQ7Z429 371 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 JAZF1Q86VZ6 243 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 MISPQ8IVT2 679 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SLC35F2Q8IXU6 374 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 FAM83FQ8NEG4 500 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-201ENST00000315286 OR6K6Q8NGW6 343 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 OR5J2Q8NH18 312 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TMCO6Q96DC7 493 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TSSK2Q96PF2 358 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SLC30A2Q9BRI3 323 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GALNT9Q9HCQ5 603 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 RPRD1BQ9NQG5 326 aaKnown RBP16.65■□□□□ 0.26
CCDC43-201ENST00000315286 CASKO14936 926 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 PLPP2O43688 288 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SELENOFO60613 162 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 NPIPB7O75200 414 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 ZFAND5O76080 213 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 TXNDC12O95881 172 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 SP9P0CG40 484 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 GAAP10253 952 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 PYCR1P32322 319 aa16.65■□□□□ 0.26
CCDC43-201ENST00000315286 MC2RQ01718 297 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms