RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 A0A1B0GWA3 101 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 M0R1B8 84 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
RFFL-201ENST00000315249 MEPCEQ7L2J0 689 aaKnown RBP12.47□□□□□ -0.41
RFFL-201ENST00000315249 OR5AS1Q8N127 324 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 OR4F15Q8NGB8 312 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 OR5J2Q8NH18 312 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 FBXO27Q8NI29 283 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PLA2G3Q9NZ20 509 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 DHRS4L1P0CG22 281 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 GAB1Q13480 694 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 PGGHGQ32M88 737 aa12.47□□□□□ -0.41
RFFL-201ENST00000315249 A0A1W2PR48 441 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 RSPRY1Q96DX4 576 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 ANKRD34BA5PLL1 514 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 CXADRP78310 365 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 NAXDQ8IW45 347 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 SCCPDHQ8NBX0 429 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 C22orf15Q8WYQ4 148 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 HES7Q9BYE0 225 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 COL9A1P20849 921 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
RFFL-201ENST00000315249 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.41
RFFL-201ENST00000315249 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.41
RFFL-201ENST00000315249 MFSD12Q6NUT3 480 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 COQ8AQ8NI60 647 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 LGALS12Q96DT0 336 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 EVA1AQ9H8M9 152 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 ACOT13Q9NPJ3 140 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 PROCRQ9UNN8 238 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 LRRC30A6NM36 301 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 ARNTLO00327 626 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 TNFSF11O14788 317 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.41
RFFL-201ENST00000315249 IFNA5P01569 189 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 P2RX1P51575 399 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 FRMPD2BQ6IN97 320 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 MEX3BQ6ZN04 569 aaKnown RBP12.46□□□□□ -0.41
RFFL-201ENST00000315249 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 SMRP1Q8NCR6 262 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 APMAPQ9HDC9 416 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 ST14Q9Y5Y6 855 aa12.46□□□□□ -0.41
RFFL-201ENST00000315249 A0A1W2PNR3 127 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 A0A1W2PPE2 198 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 A0A1W2PR64 198 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 A0A1W2PRV1 198 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 TMEM72A0PK05 275 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 TOR1AO14656 332 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 HRO43593 1189 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 PTAFRP25105 342 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 RAB12Q6IQ22 244 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 GOLM1Q8NBJ4 401 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 NXPH2O95156 264 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 EDDM3BP56851 147 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 EXOSC6Q5RKV6 272 aaKnown RBP12.46□□□□□ -0.42
RFFL-201ENST00000315249 TBPL2Q6SJ96 375 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 TMEM150AQ86TG1 271 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 COMTD1Q86VU5 262 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.42
RFFL-201ENST00000315249 CHPT1Q8WUD6 406 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 OLAHQ9NV23 265 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 SLC17A4Q9Y2C5 497 aa12.46□□□□□ -0.42
RFFL-201ENST00000315249 GNAO1P09471 354 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 ARF1P84077 181 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 HES1Q14469 280 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 CBLL1Q75N03 491 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 ZNF417Q8TAU3 575 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 LYSMD1Q96S90 227 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 SYT4Q9H2B2 425 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 OR52A5Q9H2C5 316 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 C14orf119Q9NWQ9 140 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 TRAPPC2LQ9UL33 140 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 UBFD1O14562 309 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 SEC14L2O76054 403 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 FCGR2AP12318 317 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 TRHRP34981 398 aaPredicted RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 IKZF1Q13422 519 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 MOGQ16653 247 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 OTUD1Q5VV17 481 aaPredicted RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 SLX4IPQ5VYV7 408 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 CCDC71LQ8N9Z2 235 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 S100PBPQ96BU1 408 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 TIMM8BQ9Y5J9 83 aaPredicted RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 A8MVM7 634 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 CCDC86Q9H6F5 360 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 TREM1Q9NP99 234 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 POLE4Q9NR33 117 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 FGF17O60258 216 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 ACSM3Q53FZ2 586 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 TMEM255BQ8WV15 326 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms