RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 SFXN3Q9BWM7 321 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 ANKRD19PQ9H560 264 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 EMC9Q9Y3B6 208 aa19.92■□□□□ 0.78
HOXD4-201ENST00000306324 A0A1W2PRQ8 180 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 TCRBV3S1A0A5B6 114 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 AQP7P3A6NL99 342 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 FAM90A27PA6NNH2 459 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 M0R082 166 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 PIP5K1CO60331 668 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 SS18L1O75177 396 aaPredicted RBP19.91■□□□□ 0.78
HOXD4-201ENST00000306324 GADD45GO95257 159 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 AGAP20933 346 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 RRM2P31350 389 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 MAGEA2P43356 314 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 LSM11P83369 360 aaKnown RBP eCLIP19.91■□□□□ 0.78
HOXD4-201ENST00000306324 DGCR6Q14129 220 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 CDSNQ15517 529 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF74Q16587 644 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ZSCAN26Q16670 478 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 TMEM225Q6GV28 225 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 VWA1Q6PCB0 445 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 FAM214BQ7L5A3 538 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 RRM2BQ7LG56 351 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 GPAT4Q86UL3 456 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF417Q8TAU3 575 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 SLC7A13Q8TCU3 470 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF775Q96BV0 537 aaPredicted RBP19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ZNF587Q96SQ5 575 aaPredicted RBP19.91■□□□□ 0.78
HOXD4-201ENST00000306324 ASPNQ9BXN1 380 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 C20orf141Q9NUB4 165 aa19.91■□□□□ 0.78
HOXD4-201ENST00000306324 UTP20O75691 2785 aaKnown RBP19.9■□□□□ 0.78
HOXD4-201ENST00000306324 A0A087WUU8 490 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 TNFSF13O75888 250 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 MT-ATP6P00846 226 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 NQO1P15559 274 aaKnown RBP19.9■□□□□ 0.78
HOXD4-201ENST00000306324 AGTR1P30556 359 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 KIR2DL2P43627 348 aaPredicted RBP19.9■□□□□ 0.78
HOXD4-201ENST00000306324 SMIM11AP58511 58 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 TMEM201Q5SNT2 666 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 TBPL2Q6SJ96 375 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 MAMDC2Q7Z304 686 aaPredicted RBP19.9■□□□□ 0.78
HOXD4-201ENST00000306324 NRMQ8IXM6 262 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 LILRB4Q8NHJ6 448 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 CHID1Q9BWS9 393 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 UCK2Q9BZX2 261 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 CHST11Q9NPF2 352 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 NANSQ9NR45 359 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 CORINQ9Y5Q5 1042 aa19.9■□□□□ 0.78
HOXD4-201ENST00000306324 SPTAN1Q13813 2472 aaKnown RBP19.9■□□□□ 0.78
HOXD4-201ENST00000306324 HCFC1P51610 2035 aa19.89■□□□□ 0.78
HOXD4-201ENST00000306324 TRBV4-1A0A0J9YWV2 114 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 ZNF716A6NP11 495 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 CLDN14O95500 239 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 IL18BPO95998 194 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 YES1P07947 543 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 IFI30P13284 250 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 GUSBP1Q15486 140 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 PODNL1Q6PEZ8 512 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 H1FNTQ75WM6 255 aaPredicted RBP19.89■□□□□ 0.77
HOXD4-201ENST00000306324 LRRC17Q8N6Y2 441 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 RELL2Q8NC24 303 aaPredicted RBP19.89■□□□□ 0.77
HOXD4-201ENST00000306324 SGTBQ96EQ0 304 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 DHRS1Q96LJ7 313 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 C12orf49Q9H741 205 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 BCO1Q9HAY6 547 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 GP6Q9HCN6 339 aa19.89■□□□□ 0.77
HOXD4-201ENST00000306324 ING1Q9UK53 422 aaPredicted RBP19.89■□□□□ 0.77
HOXD4-201ENST00000306324 EEF1E1-BLOC1S5C9J1V9 151 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 EEF1E1O43324 174 aaKnown RBP19.88■□□□□ 0.77
HOXD4-201ENST00000306324 FZD7O75084 574 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 SMNDC1O75940 238 aaKnown RBP eCLIP19.88■□□□□ 0.77
HOXD4-201ENST00000306324 P2RY4P51582 365 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 IL1RL1Q01638 556 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 PMS2P3Q13401 168 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 EEF1A1P5Q5VTE0 462 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 MBOAT2Q6ZWT7 520 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 BTLAQ7Z6A9 289 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 RNF113BQ8IZP6 322 aaKnown RBP19.88■□□□□ 0.77
HOXD4-201ENST00000306324 KDM8Q8N371 416 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 BPIFA2Q96DR5 249 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 FKRPQ9H9S5 495 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 EMC3Q9P0I2 261 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 B3GALT5Q9Y2C3 310 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 ICE1Q9Y2F5 2266 aa19.88■□□□□ 0.77
HOXD4-201ENST00000306324 NKX2-6A6NCS4 301 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 VAMP5O95183 116 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 HIST1H2ABP04908 130 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 HOXB6P17509 224 aaKnown RBP19.87■□□□□ 0.77
HOXD4-201ENST00000306324 CCNIQ14094 377 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 SLC17A1Q14916 467 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 PDK3Q15120 406 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 SLC25A35Q3KQZ1 300 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 HIST3H2AQ7L7L0 130 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 SLC46A3Q7Z3Q1 461 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 MEX3DQ86XN8 651 aaKnown RBP19.87■□□□□ 0.77
HOXD4-201ENST00000306324 SCAIQ8N9R8 606 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 OR6K3Q8NGY3 331 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 OR5J2Q8NH18 312 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 HIST1H2ACQ93077 130 aa19.87■□□□□ 0.77
HOXD4-201ENST00000306324 STARD4Q96DR4 205 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms