RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 MAL2Q969L2 176 aa17.9■□□□□ 0.46
RER1-201ENST00000306256 FBXO17Q96EF6 278 aa17.9■□□□□ 0.46
RER1-201ENST00000306256 TNFRSF13CQ96RJ3 184 aa17.9■□□□□ 0.46
RER1-201ENST00000306256 PIF1Q9H611 641 aa17.9■□□□□ 0.46
RER1-201ENST00000306256 CACYBPQ9HB71 228 aaKnown RBP17.9■□□□□ 0.46
RER1-201ENST00000306256 NKIRAS1Q9NYS0 192 aa17.9■□□□□ 0.46
RER1-201ENST00000306256 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.9■□□□□ 0.464e-8■■■■■ 31.9
RER1-201ENST00000306256 A0A0G2JPF8 293 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 TMEM247A6NEH6 219 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 HNRNPCL2B2RXH8 293 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 HNRNPCL3B7ZW38 293 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 ZNF587BE7ETH6 402 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 HNRNPCL1O60812 293 aaKnown RBP17.89■□□□□ 0.45
RER1-201ENST00000306256 NPIPB7O75200 414 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 HNRNPCL4P0DMR1 293 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 EFNA4P52798 201 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 TUBA1BP68363 451 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 TUBA4AP68366 448 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 CHRNB3Q05901 458 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 LOXL1Q08397 574 aaPredicted RBP17.89■□□□□ 0.45
RER1-201ENST00000306256 CHRFAM7AQ494W8 412 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 NIPAL3Q6P499 406 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 SLC2A7Q6PXP3 512 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 TUBA1AQ71U36 451 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 ABHD12BQ7Z5M8 362 aaPredicted RBP17.89■□□□□ 0.45
RER1-201ENST00000306256 EPHX4Q8IUS5 362 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 SPATA3Q8NHX4 192 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 C10orf105Q8TEF2 133 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 SLC25A36Q96CQ1 311 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 TMEM45AQ9NWC5 275 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 ZNF232Q9UNY5 417 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 STAB1Q9NY15 2570 aa17.89■□□□□ 0.45
RER1-201ENST00000306256 MXRA5Q9NR99 2828 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 A0A096LPI6 279 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 IGHV1-18A0A0C4DH31 117 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 NR5A2O00482 541 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 UPK3AO75631 287 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 AHSA1O95433 338 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 SLC25A16P16260 332 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 MST1LQ2TV78 715 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 ZNF311Q5JNZ3 666 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 MIER2Q8N344 545 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 KDM8Q8N371 416 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 STK35Q8TDR2 534 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 GTF2H4Q92759 462 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 PTDSS2Q9BVG9 487 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 PAIP1Q9H074 479 aaKnown RBP17.88■□□□□ 0.45
RER1-201ENST00000306256 PCDHB14Q9Y5E9 798 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 PMF1-BGLAPU3KQ54 211 aa17.88■□□□□ 0.45
RER1-201ENST00000306256 A0A096LPE4 126 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 A0A1W2PPZ6 126 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 FTCDNL1E5RQL4 147 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 ZNF500O60304 480 aaPredicted RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 VAMP5O95183 116 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 PNMTP11086 282 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 BMP4P12644 408 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 RPS5P46782 204 aaKnown RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 VLDLRP98155 873 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 EGR4Q05215 589 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 RGNQ15493 299 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 ZSWIM7Q19AV6 140 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 C1QTNF12Q5T7M4 302 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 BCL2L2Q92843 193 aaPredicted RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 KTI12Q96EK9 354 aaPredicted RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 SLC38A2Q96QD8 506 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 REPIN1Q9BWE0 567 aaKnown RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 ARMC7Q9H6L4 198 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 A4GALTQ9NPC4 353 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 OBP2BQ9NPH6 170 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 THUMPD1Q9NXG2 353 aaKnown RBP17.87■□□□□ 0.45
RER1-201ENST00000306256 SEC14L4Q9UDX3 406 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 RASD1Q9Y272 281 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 IFT52Q9Y366 437 aa17.87■□□□□ 0.45
RER1-201ENST00000306256 RNF212BA8MTL3 300 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 CLIC1O00299 241 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 IFNA2P01563 188 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 ZNF16P17020 682 aaPredicted RBP17.86■□□□□ 0.45
RER1-201ENST00000306256 HOXB9P17482 250 aaPredicted RBP17.86■□□□□ 0.45
RER1-201ENST00000306256 SLC18A1P54219 525 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 UBE2NP61088 152 aaKnown RBP17.86■□□□□ 0.45
RER1-201ENST00000306256 SWI5Q1ZZU3 235 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 PODNL1Q6PEZ8 512 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 MFSD8Q8NHS3 518 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 TLCD1Q96CP7 247 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 BOD1Q96IK1 185 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 SORCS2Q96PQ0 1159 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 KCNS3Q9BQ31 491 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 RSPO3Q9BXY4 272 aaPredicted RBP17.86■□□□□ 0.45
RER1-201ENST00000306256 NELFAQ9H3P2 528 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 SEC61A2Q9H9S3 476 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 BCL2L10Q9HD36 194 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 PRDM4Q9UKN5 801 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 USH1CQ9Y6N9 552 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 CUBNO60494 3623 aa17.86■□□□□ 0.45
RER1-201ENST00000306256 CSF3P09919 207 aa17.85■□□□□ 0.45
RER1-201ENST00000306256 GTF2E2P29084 291 aaKnown RBP17.85■□□□□ 0.45
RER1-201ENST00000306256 CLDN17P56750 224 aa17.85■□□□□ 0.45
RER1-201ENST00000306256 ROR2Q01974 943 aaKnown RBP17.85■□□□□ 0.45
RER1-201ENST00000306256 COMTD1Q86VU5 262 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms