RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 VSTM2BA6NLU5 285 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 CPSF4LA6NMK7 179 aaKnown RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 IDSB3KWA1 339 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SURF4O15260 269 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 HPP00738 406 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 IGHA1P01876 353 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 HMGN1P05114 100 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 LIMS3P0CW19 117 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 LIMS4P0CW20 117 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 C8orf89P0DMQ9 161 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 IL7P13232 177 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 EDN3P14138 238 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 PRF1P14222 555 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 HTR1FP30939 366 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 TRHRP34981 398 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC1A3P43003 542 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 RPS5P46782 204 aaKnown RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 CDH11P55287 796 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 PER3P56645 1201 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 RGS8P57771 180 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 OR2B6P58173 313 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 RAB8AP61006 207 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 RPS25P62851 125 aaKnown RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 BTN3A2P78410 334 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 MFAP5Q13361 173 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ASAH1Q13510 395 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 DSG2Q14126 1118 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 PGGHGQ32M88 737 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ARHGAP11BQ3KRB8 267 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 EIPR1Q53HC9 387 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 YOD1Q5VVQ6 348 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 GFRALQ6UXV0 394 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 FRRS1Q6ZNA5 592 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF620Q6ZNG0 422 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 PLEKHM3Q6ZWE6 761 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 MBOAT2Q6ZWT7 520 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 NDUFAF7Q7L592 441 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ASPGQ86U10 573 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC7A5P1Q8MH63 180 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SHISA5Q8N114 240 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 OR2L13Q8N349 312 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 LRRC25Q8N386 305 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 CELF2-AS1Q8N7Q2 184 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 BCORP1Q8N888 145 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 OR4Q3Q8NH05 313 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 OR52N1Q8NH53 320 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ADAMTS15Q8TE58 950 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 AP3S1Q92572 193 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC9A6Q92581 669 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 RERGQ96A58 199 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 SLC41A3Q96GZ6 507 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 MCHR1Q99705 422 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ZFYVE21Q9BQ24 234 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 MIXL1Q9H2W2 232 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 KRCC1Q9NPI7 259 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 CTPS2Q9NRF8 586 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 C14orf119Q9NWQ9 140 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 KCMF1Q9P0J7 381 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF443Q9Y2A4 671 aaPredicted RBP7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 CDH10Q9Y6N8 788 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 HEATR5BQ9P2D3 2071 aa7.15□□□□□ -1.27
TM4SF1-201ENST00000305366 MYO9AB2RTY4 2548 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 ESPL1Q14674 2120 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 URADA6NGE7 173 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 CHST10O43529 356 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 WDPCPO95876 746 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 ONECUT2O95948 504 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 THY1P04216 161 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 RPS4Y1P22090 263 aaKnown RBP7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 PTBP1P26599 531 aaKnown RBP eCLIP7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 SDC2P34741 201 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 PTGER1P34995 402 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 RFX2P48378 723 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 BDH1Q02338 343 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 SCN1BQ07699 218 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 FAPQ12884 760 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 HNRNPA0Q13151 305 aaKnown RBP7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 DUSP8Q13202 625 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 BAK1Q16611 211 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 ZNF628Q5EBL2 1059 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 DDI2Q5TDH0 399 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 OR2G6Q5TZ20 316 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 NXNL2Q5VZ03 156 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 FCRLBQ6BAA4 426 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 C22orf42Q6IC83 251 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 TYW3Q6IPR3 259 aaKnown RBP7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 METAP1DQ6UB28 335 aaPredicted RBP7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 IGFL2Q6UWQ7 119 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 GDF7Q7Z4P5 450 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 NRARPQ7Z6K4 114 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 HMGN2P46Q86SG4 172 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 NKAIN4Q8IVV8 208 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 ARIH2OSQ8N7S6 290 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 PSD4Q8NDX1 1056 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 OR7G2Q8NG99 324 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 OR4K14Q8NGD5 310 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 TRIM63Q969Q1 353 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 ZG16BQ96DA0 208 aa7.14□□□□□ -1.27
TM4SF1-201ENST00000305366 FAM46AQ96IP4 442 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms