RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 NMNAT2Q9BZQ4 307 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 OR11A1Q9GZK7 315 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 SLIRPQ9GZT3 109 aaKnown RBP20.19■□□□□ 0.82
SMAD1-201ENST00000302085 TAS2R5Q9NYW4 299 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 FOXJ2Q9P0K8 574 aa20.19■□□□□ 0.82
SMAD1-201ENST00000302085 CACNA1HO95180 2353 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 IGLV3-32A0A0A0MS00 114 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 RAB40ALP0C0E4 278 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 DLX5P56178 289 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 ADCK1Q86TW2 530 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 KBTBD8Q8NFY9 601 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 STK35Q8TDR2 534 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 SMAP2Q8WU79 429 aaPredicted RBP20.18■□□□□ 0.82
SMAD1-201ENST00000302085 TRMT61AQ96FX7 289 aaKnown RBP20.18■□□□□ 0.82
SMAD1-201ENST00000302085 TBX5Q99593 518 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 PARD6AQ9NPB6 346 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 SDHAF3Q9NRP4 125 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 STUB1Q9UNE7 303 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 FARSAQ9Y285 508 aaKnown RBP20.18■□□□□ 0.82
SMAD1-201ENST00000302085 PCDHGA1Q9Y5H4 931 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 WIF1Q9Y5W5 379 aa20.18■□□□□ 0.82
SMAD1-201ENST00000302085 CHCHD2Q9Y6H1 151 aaPredicted RBP20.18■□□□□ 0.82
SMAD1-201ENST00000302085 CCDC187A0A096LP49 1063 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 TXNDC12O95881 172 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 MT-ATP6P00846 226 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 PSMA1P25786 263 aaKnown RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 MSX1P28360 303 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 BMXP51813 675 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 MAMDC2Q7Z304 686 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 OR10H4Q8NGA5 316 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 OR51L1Q8NGJ5 315 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 SMPDL3BQ92485 455 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 CDCP1Q9H5V8 836 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 ISG20L2Q9H9L3 353 aaKnown RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 ASB6Q9NWX5 421 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 CAB39Q9Y376 341 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 SF3B6Q9Y3B4 125 aaKnown RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 ZNF318Q5VUA4 2279 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 DAPL1A0PJW8 107 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 OTX2P32243 289 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 SERPINB10P48595 397 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 INPP5JQ15735 1006 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 FAM69AQ5T7M9 428 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 GDPGP1Q6ZNW5 385 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 ZFP41Q8N8Y5 198 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 RELTQ969Z4 430 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 ZMYND19Q96E35 227 aaPredicted RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 EXOSC4Q9NPD3 245 aaKnown RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 VDAC3Q9Y277 283 aa20.17■□□□□ 0.82
SMAD1-201ENST00000302085 YARS2Q9Y2Z4 477 aaKnown RBP20.17■□□□□ 0.82
SMAD1-201ENST00000302085 PNMA8CA0A1B0GUJ8 204 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 LRRTM2O43300 516 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 DIO1P49895 249 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 ACSM1Q08AH1 577 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 GALEQ14376 348 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 IL20RBQ6UXL0 311 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 LSM14AQ8ND56 463 aaKnown RBP20.16■□□□□ 0.82
SMAD1-201ENST00000302085 ALG8Q9BVK2 526 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 INPP5EQ9NRR6 644 aa20.16■□□□□ 0.82
SMAD1-201ENST00000302085 ETV2O00321 342 aaPredicted RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 SPI1P17947 270 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 SDHAP31040 664 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 APOBEC1P41238 236 aaKnown RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 ZNF85Q03923 595 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 DCTN2Q13561 401 aaKnown RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 SSPNQ14714 243 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 CSRP2Q16527 193 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 LEG1Q6P5S2 330 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 OPN5Q6U736 354 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 UFD1Q92890 307 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 TMEM203Q969S6 136 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 DACH2Q96NX9 599 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 TSPAN32Q96QS1 320 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 ASPNQ9BXN1 380 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 PLGRKTQ9HBL7 147 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 TP53I11O14683 189 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 SERPINI2O75830 405 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 OPRL1P41146 370 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 MLF1P58340 268 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 RPS25P62851 125 aaKnown RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 FOXF1Q12946 379 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 PON3Q15166 354 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 HES3Q5TGS1 186 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 TMPRSS11AQ6ZMR5 421 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 RPS19BP1Q86WX3 136 aaKnown RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 OR5J2Q8NH18 312 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 CPNE5Q9HCH3 593 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 GRHPRQ9UBQ7 328 aa20.15■□□□□ 0.82
SMAD1-201ENST00000302085 ZNF346Q9UL40 294 aaKnown RBP20.15■□□□□ 0.82
SMAD1-201ENST00000302085 SHISA8B8ZZ34 492 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 EFNA2O43921 213 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 DXOO77932 396 aaKnown RBP20.14■□□□□ 0.81
SMAD1-201ENST00000302085 AHSA1O95433 338 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 GRPRP30550 384 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 LGALS3BPQ08380 585 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 Q0VFX4 171 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 POU4F2Q12837 409 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 GGTLC2Q14390 218 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 TRIP6Q15654 476 aaKnown RBP20.14■□□□□ 0.81
SMAD1-201ENST00000302085 SGCBQ16585 318 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms