RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ECH1Q13011 328 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 KRT33BQ14525 404 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 TCEA2Q15560 299 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 RNLSQ5VYX0 342 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 DHRS7BQ6IAN0 325 aaPredicted RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 TMPRSS12Q86WS5 348 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 FAM71CQ8NEG0 241 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 SLC25A36Q96CQ1 311 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 TRMT2BQ96GJ1 504 aaKnown RBP13.28□□□□□ -0.28
CDT1-201ENST00000301019 FBXO44Q9H4M3 255 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 UQCC1Q9NVA1 299 aa13.28□□□□□ -0.28
CDT1-201ENST00000301019 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 FCMRO60667 390 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 NDUFB6O95139 128 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 OR8U8P0C7N1 319 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 NPIPA8P0DM63 369 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 MGMTP16455 207 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 CDC42EP1Q00587 391 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 JMJD6Q6NYC1 403 aaPredicted RBP13.27□□□□□ -0.28
CDT1-201ENST00000301019 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 CD163Q86VB7 1156 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 CCDC116Q8IYX3 515 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 OR1J2Q8NGS2 313 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 OR5K2Q8NHB8 316 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 TMEM159Q96B96 161 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 S100A16Q96FQ6 103 aaKnown RBP13.27□□□□□ -0.28
CDT1-201ENST00000301019 TEX12Q9BXU0 123 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 LHX3Q9UBR4 397 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 SLC7A7Q9UM01 511 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 MRPS23Q9Y3D9 190 aaKnown RBP13.27□□□□□ -0.28
CDT1-201ENST00000301019 CASP8AP2Q9UKL3 1982 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 HEATR5BQ9P2D3 2071 aa13.27□□□□□ -0.28
CDT1-201ENST00000301019 FKTNO75072 461 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 FBXO24O75426 580 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 NFATC1O95644 943 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 GNRH1P01148 92 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 S100A8P05109 93 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 C8GP07360 202 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 PGAM2P15259 253 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 PRPH2P23942 346 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 HOXC8P31273 242 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 CRMP1Q14194 572 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 FAM199XQ6PEV8 388 aaPredicted RBP13.27□□□□□ -0.29
CDT1-201ENST00000301019 CD300LGQ6UXG3 332 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 TMPPEQ6ZT21 453 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 LRP11Q86VZ4 500 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 NKD1Q969G9 470 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 PGLYRP3Q96LB9 341 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 ZDHHC6Q9H6R6 413 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 ZDHHC3Q9NYG2 299 aa13.27□□□□□ -0.29
CDT1-201ENST00000301019 RTTNQ86VV8 2226 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 TRAV18A0A075B6X5 111 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 IRGMA1A4Y4 181 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ARRDC5A6NEK1 342 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 HMSDA8MTL9 139 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 C9JQL5 133 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 RHOP08100 348 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 TEAD1P28347 426 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 NDUFA6P56556 154 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ST8SIA6P61647 398 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 RPS27AP62979 156 aaKnown RBP13.26□□□□□ -0.29
CDT1-201ENST00000301019 UBA52P62987 128 aaKnown RBP13.26□□□□□ -0.29
CDT1-201ENST00000301019 IRF4Q15306 451 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 PRAMEF17Q5VTA0 474 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 THSD4Q6ZMP0 1018 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 Q6ZVL8 140 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 MISPQ8IVT2 679 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 C14orf144Q96I85 54 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 OR52D1Q9H346 318 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 GTF2A1LQ9UNN4 478 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 PLXNA4Q9HCM2 1894 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 PTPRDP23468 1912 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ASGR1P07306 291 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 FBP1P09467 338 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 H2AFB1P0C5Y9 115 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 SFTA3P0C7M3 94 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ZDHHC11BP0C7U3 371 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 PYY3Q5JQD4 70 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 NKAPLQ5M9Q1 402 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 FAM71E1Q6IPT2 247 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 GRHL2Q6ISB3 625 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 FRRS1Q6ZNA5 592 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ROBO4Q8WZ75 1007 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
CDT1-201ENST00000301019 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
CDT1-201ENST00000301019 LMF1Q96S06 567 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 ADAM2Q99965 735 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 RIOK2Q9BVS4 552 aaKnown RBP13.26□□□□□ -0.29
CDT1-201ENST00000301019 ULBP3Q9BZM4 244 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 URGCP-MRPS24S4R325 110 aa13.26□□□□□ -0.29
CDT1-201ENST00000301019 GABARAPH6UMI1 98 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms