RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 FAM171A2A8MVW0 826 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 RFPL4AL1F8VTS6 287 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 PAK4O96013 591 aaPredicted RBP11.97□□□□□ -0.49
TVP23A-201ENST00000299866 PRMT2P55345 433 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 POLR2GP62487 172 aaKnown RBP eCLIP11.97□□□□□ -0.49
TVP23A-201ENST00000299866 TCTN1Q2MV58 587 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 C17orf99Q6UX52 265 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 ADIPOR2Q86V24 386 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 TMPRSS12Q86WS5 348 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 BEST3Q8N1M1 668 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 DPEP2Q9H4A9 486 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 EPHX3Q9H6B9 360 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 TCF7L1Q9HCS4 588 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 C2orf42Q9NWW7 574 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 MED31Q9Y3C7 131 aa11.97□□□□□ -0.49
TVP23A-201ENST00000299866 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 OR6C68A6NDL8 312 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 IMPA2O14732 288 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 GP1BAP07359 652 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 HIST1H1TP22492 207 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-201ENST00000299866 TRA2BP62995 288 aaKnown RBP11.96□□□□□ -0.49
TVP23A-201ENST00000299866 S100A12P80511 92 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 TAF13Q15543 124 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 FAM209BQ5JX69 171 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 OR4N5Q8IXE1 308 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 OR6K6Q8NGW6 343 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 CMTM3Q96MX0 182 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 MS4A4EQ96PG1 132 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 CNN2Q99439 309 aaKnown RBP11.96□□□□□ -0.49
TVP23A-201ENST00000299866 SLC22A11Q9NSA0 550 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 NCDNQ9UBB6 729 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 PCDHB10Q9UN67 800 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF780BQ9Y6R6 833 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 SLC25A12O75746 678 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 RAB40ALP0C0E4 278 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 SPP1P10451 314 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 FLT3LGP49771 235 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 ACTA2P62736 377 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 ACTG2P63267 376 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 MOB3CQ70IA8 216 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 TMCO2Q7Z6W1 182 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-201ENST00000299866 KRT77Q7Z794 578 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 RAB40AQ8WXH6 277 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 NUS1Q96E22 293 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF764Q96H86 408 aaPredicted RBP11.96□□□□□ -0.49
TVP23A-201ENST00000299866 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 HEATR5BQ9P2D3 2071 aa11.96□□□□□ -0.49
TVP23A-201ENST00000299866 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.5
TVP23A-201ENST00000299866 ADAM11O75078 769 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 MAS1P04201 325 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 BDKRB2P30411 391 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 MRPL2Q5T653 305 aaKnown RBP11.96□□□□□ -0.5
TVP23A-201ENST00000299866 RAB12Q6IQ22 244 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 SVBPQ8N300 66 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 C12orf45Q8N5I9 185 aaPredicted RBP11.96□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF614Q8N883 585 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 OR7G2Q8NG99 324 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 THAP6Q8TBB0 222 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 MOAP1Q96BY2 351 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 IGSF21Q96ID5 467 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 SEC22AQ96IW7 307 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 GAL3ST1Q99999 423 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 CRB3Q9BUF7 120 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 MEPEQ9NQ76 525 aaPredicted RBP11.96□□□□□ -0.5
TVP23A-201ENST00000299866 FBXO34Q9NWN3 711 aa11.96□□□□□ -0.5
TVP23A-201ENST00000299866 A0A1W2PPV9 198 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 TMEM218A2RU14 115 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 AKR7A3O95154 331 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 IFNGP01579 166 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 OR2T7P0C7T2 308 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 HIST1H1CP16403 213 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SYN1P17600 705 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 BCL6P41182 706 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 MECP2P51608 486 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 NANOS3P60323 173 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SLC48A1Q6P1K1 146 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 UNQ9370/PRO34162Q6UXP9 181 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 RNF180Q86T96 592 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 AMZ2Q86W34 360 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CCDC36Q8IYA8 594 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 LINC01555Q8NAE3 123 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 OR2T27Q8NH04 317 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 VRK1Q99986 396 aaPredicted RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SCN3AQ9NY46 2000 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 PEX12O00623 359 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 CCSO14618 274 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 EIF4E2O60573 245 aaKnown RBP11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ZFPL1O95159 310 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 RPN2P04844 631 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ELNP15502 786 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 BLOC1S1P78537 153 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 DUSP5Q16690 384 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ODF4Q2M2E3 257 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 ZNF528Q3MIS6 628 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 AMZ1Q400G9 498 aa11.95□□□□□ -0.5
TVP23A-201ENST00000299866 SLC16A13Q7RTY0 426 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms