RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CD300LDQ6UXZ3 194 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 ZNF730Q6ZMV8 503 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 PRIMA1Q86XR5 153 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 OR4K5Q8NGD3 323 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 GABARAPL3Q9BY60 117 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 TUBA8Q9NY65 449 aaPredicted RBP18.92■□□□□ 0.62
SMCO4-201ENST00000298966 UBAP1Q9NZ09 502 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 TMEM5Q9Y2B1 443 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 COL6A5A8TX70 2615 aa18.92■□□□□ 0.62
SMCO4-201ENST00000298966 KIAA1324LA8MWY0 1029 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-201ENST00000298966 HCRTR2O43614 444 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 ZNF354AO60765 605 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-201ENST00000298966 PNMTP11086 282 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 FOXO1Q12778 655 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 CBFBQ13951 182 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 FBXL19-AS1Q494R0 122 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 SHEQ5VZ18 495 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 KRT80Q6KB66 452 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 SLC30A6Q6NXT4 461 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 MBOAT2Q6ZWT7 520 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 TSPYL5Q86VY4 417 aaPredicted RBP18.91■□□□□ 0.62
SMCO4-201ENST00000298966 TMCO5AQ8N6Q1 288 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 AQP11Q8NBQ7 271 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 OR5W2Q8NH69 310 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 PIGXQ8TBF5 258 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 NODALQ96S42 347 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 CNIH4Q9P003 139 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 SPRR3Q9UBC9 169 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 SLC7A7Q9UM01 511 aa18.91■□□□□ 0.62
SMCO4-201ENST00000298966 A0A087WUU8 490 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 IGLV3-32A0A0A0MS00 114 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 A0A1B0GWA3 101 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 TUBAL3A6NHL2 446 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 E9PQ18 207 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 BCAS1O75363 584 aaPredicted RBP18.9■□□□□ 0.62
SMCO4-201ENST00000298966 IGF2P01344 180 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 LYNP07948 512 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 GNAO1P09471 354 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 EPXP11678 715 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 ESRRGP62508 458 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 NKX6-1P78426 367 aaPredicted RBP18.9■□□□□ 0.62
SMCO4-201ENST00000298966 ZNF117Q03924 483 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 ALG10BQ5I7T1 473 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 MARCH3Q86UD3 253 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 KIF18BQ86Y91 864 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 B4GALNT2Q8NHY0 566 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 GNPDA2Q8TDQ7 276 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 TMEM234Q8WY98 164 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 SLC19A3Q9BZV2 496 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 METTL7AQ9H8H3 244 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 BEX4Q9NWD9 120 aaPredicted RBP18.9■□□□□ 0.62
SMCO4-201ENST00000298966 KLRF1Q9NZS2 232 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 ICAM5Q9UMF0 924 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 CARD8Q9Y2G2 431 aa18.9■□□□□ 0.62
SMCO4-201ENST00000298966 ANKRD33BA6NCL7 494 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 MITFO75030 526 aaPredicted RBP18.89■□□□□ 0.61
SMCO4-201ENST00000298966 LY6G6DO95868 133 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 HOXC5Q00444 222 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 SEC23BQ15437 767 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 PGBD2Q6P3X8 592 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 CDK20Q8IZL9 346 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 OR9Q2Q8NGE9 314 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 PAQR8Q8TEZ7 354 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 DTNBP1Q96EV8 351 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 PRSS27Q9BQR3 290 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 ZNF426Q9BUY5 554 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 GRIP2Q9C0E4 1043 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 PLEKHF2Q9H8W4 249 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 CTPS2Q9NRF8 586 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 MED31Q9Y3C7 131 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 WIF1Q9Y5W5 379 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 HSPE1-MOB4S4R3N1 261 aa18.89■□□□□ 0.61
SMCO4-201ENST00000298966 HIVEP2P31629 2446 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 LOC100130705A0A1B0GUX0 176 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 ARHGEF9O43307 516 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 SCO2O43819 266 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 GOSR1O95249 250 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 LYPD3O95274 346 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 TNFAIP8O95379 198 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 CCL3P10147 92 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 FUT4P22083 530 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 SLC1A3P43003 542 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 HTR3AP46098 478 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 CCR4P51679 360 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 GAS1P54826 345 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 LINC00114Q6XXX2 140 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 SEM1Q6ZVN7 128 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 GALNT5Q7Z7M9 940 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 KRTAP1-3Q8IUG1 177 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 CADM2Q8N3J6 435 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 GATSQ8NAP1 163 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 SETD9Q8NE22 299 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 OR10G3Q8NGC4 313 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 SPATA3Q8NHX4 192 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 ZNF563Q8TA94 476 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 TMEM239Q8WW34 195 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 ST8SIA1Q92185 356 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 PITX2Q99697 317 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 PRR14Q9BWN1 585 aa18.88■□□□□ 0.61
SMCO4-201ENST00000298966 RIBC2Q9H4K1 309 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms