RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CAMK2AQ9UQM7 478 aa22.33■■□□□ 1.17
SPTSSA-201ENST00000298130 SERPINA3P01011 423 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 KIAA1024LP59773 190 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 PITPNAQ00169 270 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 STX4Q12846 297 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 PLA2G7Q13093 441 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 HYAL4Q2M3T9 481 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 CDONQ4KMG0 1287 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 CD276Q5ZPR3 534 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 SLC37A2Q8TED4 501 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 SEMA4CQ9C0C4 833 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 LIN7BQ9HAP6 207 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 MKKSQ9NPJ1 570 aaPredicted RBP22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 DLL4Q9NR61 685 aa22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 ELF5Q9UKW6 265 aaPredicted RBP22.33■■□□□ 1.16
SPTSSA-201ENST00000298130 GPANK1O95872 356 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 CSTAP01040 98 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 RAF1P04049 648 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 F13BP05160 661 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 TMIGD3P0DMS9 266 aaPredicted RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 MAOAP21397 527 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 AQP2P41181 271 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 KCNAB1Q14722 419 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 TOR2AQ5JU69 321 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 LEG1Q6P5S2 330 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 FAM199XQ6PEV8 388 aaPredicted RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 ULK3Q6PHR2 472 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 OR13H1Q8NG92 308 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 OR11G2Q8NGC1 345 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 SUN5Q8TC36 379 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 SLC25A38Q96DW6 304 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 CCDC120Q96HB5 630 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 MRGPRX1Q96LB2 322 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 SRA1Q9HD15 236 aaKnown RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 ICAM5Q9UMF0 924 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 KLHDC2Q9Y2U9 406 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 OR10H1Q9Y4A9 318 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 TVP23AA6NH52 213 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 C2orf74A8MZ97 194 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 ZNHIT3Q15649 155 aaPredicted RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 PHOSPHO2Q8TCD6 241 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 SMIM4Q8WVI0 70 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 ING1Q9UK53 422 aaPredicted RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 PCOLCE2Q9UKZ9 415 aa22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 PPIEQ9UNP9 301 aaKnown RBP22.32■■□□□ 1.16
SPTSSA-201ENST00000298130 TMEM72A0PK05 275 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 CDKN2AP42771 156 aaKnown RBP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 DIO1P49895 249 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 POU4F2Q12837 409 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ESCO2Q56NI9 601 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 RPL22L1Q6P5R6 122 aaKnown RBP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 BTN2A1Q7KYR7 527 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 TEX19Q8NA77 164 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 FOXN4Q96NZ1 517 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 HRASLSQ9HDD0 168 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 YBX2Q9Y2T7 364 aaKnown RBP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 EPOPA6NHQ4 379 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 C17orf51A8MQB3 221 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ARPC1BO15143 372 aaKnown RBP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ZNF250P15622 560 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 PPM1FP49593 454 aaPredicted RBP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 CCR9P51686 369 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ACTA2P62736 377 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ACTG2P63267 376 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ILF3Q12906 894 aaKnown RBP eCLIP22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ANGPT1Q15389 498 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 SLC25A25Q6KCM7 469 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 APOOLQ6UXV4 268 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 SIX5Q8N196 739 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 SLC2A12Q8TD20 617 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 ERVK-19Q9WJR5 959 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 SDK1Q7Z5N4 2213 aa22.31■■□□□ 1.16
SPTSSA-201ENST00000298130 SLC35E2P0CK97 266 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 RAD52P43351 418 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 CCDC28AQ8IWP9 274 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 OR14A16Q8NHC5 309 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 ZNF524Q96C55 264 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 SYNDIG1Q9H7V2 258 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 BAIAP2Q9UQB8 552 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 DCTN6O00399 190 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 OIP5O43482 229 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 KHDRBS3O75525 346 aaKnown RBP22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 AK1P00568 194 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 HOXD11P31277 338 aaPredicted RBP22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 ZCCHC12Q6PEW1 402 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 POMZP3Q6PJE2 187 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 NARFLQ9H6Q4 476 aa22.3■■□□□ 1.16
SPTSSA-201ENST00000298130 IFITM5A6NNB3 132 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 HNRNPA2B1P22626 353 aaKnown RBP22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 DCTDP32321 178 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 EXOSC2Q13868 293 aaKnown RBP22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 UBE2NLQ5JXB2 153 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 TMEM92Q6UXU6 159 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 NLRC3Q7RTR2 1065 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 VSTM2LQ96N03 204 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 MOGAT1Q96PD6 335 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 DDOQ99489 341 aa22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 GATBO75879 557 aaKnown RBP22.29■■□□□ 1.16
SPTSSA-201ENST00000298130 TPOP07202 933 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms