RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 LYPD8Q6UX82 237 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 OR10H4Q8NGA5 316 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 OR51L1Q8NGJ5 315 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 OR8K3Q8NH51 312 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 OR5W2Q8NH69 310 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 KTI12Q96EK9 354 aaPredicted RBP19.39■□□□□ 0.69
SOX17-201ENST00000297316 C1GALT1C1Q96EU7 318 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 NPAS1Q99742 590 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 ALG8Q9BVK2 526 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 ADAM19Q9H013 955 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 KLHL1Q9NR64 748 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 PADI1Q9ULC6 663 aa19.39■□□□□ 0.69
SOX17-201ENST00000297316 TGM1P22735 817 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 ERVK-25P63136 954 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 E2F1Q01094 437 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 MXD1Q05195 221 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 DNASE1L3Q13609 305 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 INSL4Q14641 139 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 FAM98AQ8NCA5 519 aaKnown RBP19.38■□□□□ 0.69
SOX17-201ENST00000297316 OR10G3Q8NGC4 313 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 RASD2Q96D21 266 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 IMMP1LQ96LU5 166 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 TAAR9Q96RI9 348 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 TMEM43Q9BTV4 400 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 FAM86C1Q9NVL1 165 aa19.38■□□□□ 0.69
SOX17-201ENST00000297316 SIRT4Q9Y6E7 314 aaPredicted RBP19.38■□□□□ 0.69
SOX17-201ENST00000297316 CTDSP2O14595 271 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 EIF4E2O60573 245 aaKnown RBP19.37■□□□□ 0.69
SOX17-201ENST00000297316 SBK2P0C263 348 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 TCN2P20062 427 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 AQP2P41181 271 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 FOLR3P41439 243 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 TCF15Q12870 199 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 COL28A1Q2UY09 1125 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 C6orf15Q6UXA7 325 aaPredicted RBP19.37■□□□□ 0.69
SOX17-201ENST00000297316 SLC43A2Q8N370 569 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 RFLNBQ8N5W9 214 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 OR11G2Q8NGC1 345 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CT55Q8WUE5 264 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 ITPKCQ96DU7 683 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 MMP25Q9NPA2 562 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 NRIP3Q9NQ35 241 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CDRT1O95170 752 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CYC1P08574 325 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CELP19835 753 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 SOX6P35712 828 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 SLC6A8P48029 635 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 P2RX1P51575 399 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 EFR3AQ14156 821 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CRTC2Q53ET0 693 aaPredicted RBP19.37■□□□□ 0.69
SOX17-201ENST00000297316 C1QL3Q5VWW1 255 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 DPY19L2P2Q6ZN68 376 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 C10orf53Q8N6V4 93 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 MINDY2Q8NBR6 621 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 RASL10BQ96S79 203 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 CCNL2Q96S94 520 aaPredicted RBP19.37■□□□□ 0.69
SOX17-201ENST00000297316 CDC6Q99741 560 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 KATNB1Q9BVA0 655 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 ZNF700Q9H0M5 742 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 TPK1Q9H3S4 243 aa19.37■□□□□ 0.69
SOX17-201ENST00000297316 SMIM30A4D0T7 59 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 IFNGP01579 166 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 GABRA5P31644 462 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 ZNF85Q03923 595 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 ACSM1Q08AH1 577 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 QPRTQ15274 297 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 HES3Q5TGS1 186 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 MARCH9Q86YJ5 346 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 GPR119Q8TDV5 335 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 ZMYND19Q96E35 227 aaPredicted RBP19.36■□□□□ 0.69
SOX17-201ENST00000297316 LIN37Q96GY3 246 aaPredicted RBP19.36■□□□□ 0.69
SOX17-201ENST00000297316 NMNAT3Q96T66 252 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 DDOQ99489 341 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 TMED9Q9BVK6 235 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 CAB39Q9Y376 341 aaPredicted RBP19.36■□□□□ 0.69
SOX17-201ENST00000297316 ALPK2Q86TB3 2170 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 DAPL1A0PJW8 107 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 PRR33A8MZF0 331 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 BLOC1S5-TXNDC5H3BN57 136 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 DLGAP3O95886 979 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 PGCP20142 388 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 HCCSP53701 268 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 ARMC4Q5T2S8 1044 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 CD200R1LQ6Q8B3 271 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 SSX6Q7RTT6 188 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 CADM3Q8N126 398 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 LRRC75AQ8NAA5 344 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 NPEPL1Q8NDH3 523 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 NUAK2Q9H093 628 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 ZNF160Q9HCG1 818 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 MED11Q9P086 117 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 PCSK5Q92824 1860 aa19.36■□□□□ 0.69
SOX17-201ENST00000297316 DVL2O14641 736 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 CBFBQ13951 182 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 INPP5JQ15735 1006 aaPredicted RBP19.35■□□□□ 0.69
SOX17-201ENST00000297316 PLEKHG7Q6ZR37 379 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 ARIH2OSQ8N7S6 290 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 ATP6V1C2Q8NEY4 427 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 SMPDL3BQ92485 455 aa19.35■□□□□ 0.69
SOX17-201ENST00000297316 TAAR8Q969N4 342 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms