RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CHAF1BQ13112 559 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 SLC35F1Q5T1Q4 408 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ARHGAP11AQ6P4F7 1023 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CXXC5Q7LFL8 322 aaKnown RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 ADGRG3Q86Y34 549 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CPOQ8IVL8 374 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 OR52I1Q8NGK6 324 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 RAB2BQ8WUD1 216 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 RNFT2Q96EX2 444 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 MOGAT1Q96PD6 335 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 GPX7Q96SL4 187 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 TAPBPLQ9BX59 468 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 OR2B2Q9GZK3 357 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 IRF2BPLQ9H1B7 796 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 METTL7AQ9H8H3 244 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 GPN2Q9H9Y4 310 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 CPNE5Q9HCH3 593 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 TAS2R16Q9NYV7 291 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CHCHD2Q9Y6H1 151 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 PCSK5Q92824 1860 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TMED7-TICAM2A0A0A6YYA0 188 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 MCIDASD6RGH6 385 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 M0R082 166 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 TP53I11O14683 189 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 NPIPB7O75200 414 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 HTR1FP30939 366 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 MTNR1AP48039 350 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 PRPS1P60891 318 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 C19orf57Q0VDD7 668 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 OR5M10Q6IEU7 315 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 DPY19L2P2Q6ZN68 376 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SLC16A12Q6ZSM3 486 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 RPS19BP1Q86WX3 136 aaKnown RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 DND1Q8IYX4 353 aaKnown RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 ASCC1Q8N9N2 400 aaKnown RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 BBS1Q8NFJ9 593 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SECISBP2Q96T21 854 aaKnown RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 NANSQ9NR45 359 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 PPP4R1LQ9P1A2 415 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 KCNN3Q9UGI6 736 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 ENPP5Q9UJA9 477 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 FBXL4Q9UKA2 621 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TMED7Q9Y3B3 224 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SPEF1Q9Y4P9 236 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 HRH3Q9Y5N1 445 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 EP300Q09472 2414 aaPredicted RBP14.1□□□□□ -0.15
LSM6-201ENST00000296581 TRAV36DV7A0A075B6V5 113 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SPAARA0A1B0GVQ0 90 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 RAD1O60671 282 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 RAB36O95755 333 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TSPAN19P0C672 248 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 CTRB1P17538 263 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 HK1P19367 917 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 F8A1P23610 371 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 DLSTP36957 453 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SNTA1Q13424 505 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 CARTPTQ16568 116 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 CTRB2Q6GPI1 263 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 ZNF367Q7RTV3 350 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 SLC22A16Q86VW1 577 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 GID4Q8IVV7 300 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TAAR8Q969N4 342 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 CDCP1Q9H5V8 836 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 FKRPQ9H9S5 495 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 NRIP3Q9NQ35 241 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 MED11Q9P086 117 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 ZNF229Q9UJW7 825 aa14.1□□□□□ -0.15
LSM6-201ENST00000296581 TMEM72A0PK05 275 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 FAM183AA6NL82 134 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 RIIAD1A6NNX1 92 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 ARPC3O15145 178 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 SUSD5O60279 629 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 BGLAPP02818 100 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 SSR4P51571 173 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 Q0VFX4 171 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 TIGD6Q17RP2 521 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 NIPAL3Q6P499 406 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 PLBD1Q6P4A8 553 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 LRRC75AQ8NAA5 344 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 STK35Q8TDR2 534 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 GIMAP1Q8WWP7 306 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 NTNG2Q96CW9 530 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 FRMD6Q96NE9 622 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 BCL7BQ9BQE9 202 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 P4HTMQ9NXG6 502 aa14.09□□□□□ -0.15
LSM6-201ENST00000296581 H2AFY2Q9P0M6 372 aaPredicted RBP14.09□□□□□ -0.15
LSM6-201ENST00000296581 LSM2Q9Y333 95 aaKnown RBP14.09□□□□□ -0.15
LSM6-201ENST00000296581 A8MVM7 634 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 UQCRC1P31930 480 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 TGFBR2P37173 567 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 LIMK1P53667 647 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 CDC20Q12834 499 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 FCRLBQ6BAA4 426 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 H3F3CQ6NXT2 135 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 C5orf46Q6UWT4 87 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 ASB15Q8WXK1 588 aa14.08□□□□□ -0.15
LSM6-201ENST00000296581 PTP4A1Q93096 173 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms