RNA–Protein interactions for RNA: ENST00000296027.4

CXCL5-201, Transcript of C-X-C motif chemokine ligand 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL5, Length 2,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5-201ENST00000296027 POM121CA8CG34 1229 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 TGFBR3LH3BV60 316 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 I3L1I5 382 aaPredicted RBP12.13□□□□□ -0.47
CXCL5-201ENST00000296027 TSPAN4O14817 238 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 OR2B3O76000 313 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 ST6GAL1P15907 406 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 RBMS1P29558 406 aaKnown RBP12.13□□□□□ -0.47
CXCL5-201ENST00000296027 SLC6A6P31641 620 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 PSMB10P40306 273 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 HTR2BP41595 481 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 MAGEB1P43366 347 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 GPLD1P80108 840 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 DLX2Q07687 328 aaPredicted RBP12.13□□□□□ -0.47
CXCL5-201ENST00000296027 FCN2Q15485 313 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 SLC36A2Q495M3 483 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 RSC1A1Q92681 617 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
CXCL5-201ENST00000296027 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 TWSG1Q9GZX9 223 aa12.13□□□□□ -0.47
CXCL5-201ENST00000296027 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
CXCL5-201ENST00000296027 C4orf47A7E2U8 309 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 IDSB3KWA1 339 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 F8W036 122 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 AK1P00568 194 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 APOC1P02654 83 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SYPP08247 313 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 APEHP13798 732 aaKnown RBP12.12□□□□□ -0.47
CXCL5-201ENST00000296027 DGCR2P98153 550 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 MAT1AQ00266 395 aaKnown RBP12.12□□□□□ -0.47
CXCL5-201ENST00000296027 HYAL1Q12794 435 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 MAB21L1Q13394 359 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 CCINQ13939 588 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 ZNF655Q8N720 491 aaPredicted RBP12.12□□□□□ -0.47
CXCL5-201ENST00000296027 RCBTB1Q8NDN9 531 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 ZPLD1Q8TCW7 415 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SNAPC3Q92966 411 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 OR14A2Q96R54 314 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 ZNF426Q9BUY5 554 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 GSDMCQ9BYG8 508 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 FOLH1BQ9HBA9 442 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 C14orf105Q9NVL8 296 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 GNG8Q9UK08 70 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 A0A0J9YY10 115 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 FABP7O15540 132 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 IFNGP01579 166 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SLC35E2P0CK97 266 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 GRPRP30550 384 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 RPL4P36578 427 aaKnown RBP12.12□□□□□ -0.47
CXCL5-201ENST00000296027 TAS2R43P59537 309 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 TNK1Q13470 666 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SHHQ15465 462 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 RNF44Q7L0R7 432 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 LIX1LQ8IVB5 337 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 SNX33Q8WV41 574 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 ASB12Q8WXK4 309 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 RIT1Q92963 219 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 C12orf57Q99622 126 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 NIPAL2Q9H841 368 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 HAO2Q9NYQ3 351 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 CHRNA9Q9UGM1 479 aa12.12□□□□□ -0.47
CXCL5-201ENST00000296027 ZNF346Q9UL40 294 aaKnown RBP12.12□□□□□ -0.47
CXCL5-201ENST00000296027 TRBV2A0A0J9YWF9 115 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 TNFRSF10CO14798 259 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 SELENOFO60613 162 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 TRIM3O75382 744 aaPredicted RBP12.11□□□□□ -0.47
CXCL5-201ENST00000296027 EPXP11678 715 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 GIFP27352 417 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 CCR6P51684 374 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 PGDP52209 483 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 RNF4P78317 190 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 BTG2P78543 158 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
CXCL5-201ENST00000296027 TRAM1Q15629 374 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 PYHIN1Q6K0P9 492 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 ARHGAP11AQ6P4F7 1023 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 SIAH3Q8IW03 269 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 AVL9Q8NBF6 648 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 TRIM2Q9C040 744 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 COPS3Q9UNS2 423 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 A0A087WV48 116 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 MEN1O00255 615 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 ARHGEF9O43307 516 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 ADRB1P08588 477 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 CAPZA2P47755 286 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 STARP49675 285 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 RAB38P57729 211 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
CXCL5-201ENST00000296027 SIRPAP78324 504 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 COTL1Q14019 142 aa12.11□□□□□ -0.47
CXCL5-201ENST00000296027 ZNHIT3Q15649 155 aaPredicted RBP12.11□□□□□ -0.47
CXCL5-201ENST00000296027 NPSR1Q6W5P4 371 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms