RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR1Q1Q15612 314 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 LCN10Q6JVE6 187 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 FAM198BQ6UWH4 519 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 CPOQ8IVL8 374 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 RDH10Q8IZV5 341 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 APCDD1LQ8NCL9 501 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 OR6F1Q8NGZ6 308 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 CMC2Q9NRP2 79 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 FRYQ5TBA9 3013 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 FER1L5A0AVI2 2057 aa15.33■□□□□ 0.04
CPSF4-201ENST00000292476 ASPMQ8IZT6 3477 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SLC22A31A6NKX4 558 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SSX4O60224 188 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SLC19A2O60779 497 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 RGS9O75916 674 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ZFAND5O76080 213 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 UTS2O95399 124 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 NTN1O95631 604 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 LALBAP00709 142 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 NAGAP17050 411 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ATP6V1E1P36543 226 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 FOLR3P41439 243 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 RBM34P42696 430 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 TGM4P49221 684 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 EFR3AQ14156 821 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 EXT1Q16394 746 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 NDUFA5Q16718 116 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SLC35F1Q5T1Q4 408 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 RSBN1Q5VWQ0 802 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SPATC1Q76KD6 591 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SHFQ7M4L6 423 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 LSMEM1Q8N8F7 131 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SYT14Q8NB59 555 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ATP6V1C2Q8NEY4 427 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 OR4C3Q8NH37 302 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 NEIL3Q8TAT5 605 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SPRYD4Q8WW59 207 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 NACC2Q96BF6 587 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ZC3HAV1LQ96H79 300 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CNTNAP3BQ96NU0 1288 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CNTNAP3Q9BZ76 1288 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 OR2B2Q9GZK3 357 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 TIGARQ9NQ88 270 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 EXOSC3Q9NQT5 275 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 DNAJB12Q9NXW2 375 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 PTRH2Q9Y3E5 179 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 PCDHGB7Q9Y5F8 929 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 COL27A1Q8IZC6 1860 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CHD8Q9HCK8 2581 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 A0A1W2PQD3 144 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 HMX3A6NHT5 357 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CELP19835 753 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 AZGP1P25311 298 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CD79BP40259 229 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 MTNR1BP49286 362 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SLC26A5P58743 744 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 TAS2R43P59537 309 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 PYDC2Q56P42 97 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 LCN1P1Q5VSP4 162 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 GPALPP1Q8IXQ4 340 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 BBS1Q8NFJ9 593 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CNOT9Q92600 299 aaKnown RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ZNF486Q96H40 463 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 SNX18Q96RF0 628 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 CCNL2Q96S94 520 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ADOQ96SZ5 270 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 ATF6BQ99941 703 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 RPS6KB2Q9UBS0 482 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 MED31Q9Y3C7 131 aa15.32■□□□□ 0.04
CPSF4-201ENST00000292476 WDFY3Q8IZQ1 3526 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 IGHV3-20A0A0C4DH32 117 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 CCDC182A6NF36 153 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 OR6C70A6NIJ9 312 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 GTPBP1O00178 669 aaKnown RBP15.31■□□□□ 0.04
CPSF4-201ENST00000292476 SOCS6O14544 535 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 RGS13O14921 159 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 TSPAN2O60636 221 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 GKN3PP0CG01 181 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 IFI30P13284 250 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 ABCD3P28288 659 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 FXYD6P3P58550 94 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 GALEQ14376 348 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-201ENST00000292476 VASNQ6EMK4 673 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 FAM199XQ6PEV8 388 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-201ENST00000292476 SMARCD3Q6STE5 483 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 ESX1Q8N693 406 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 SIRT6Q8N6T7 355 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 KCTD12Q96CX2 325 aaKnown RBP15.31■□□□□ 0.04
CPSF4-201ENST00000292476 OMA1Q96E52 524 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 RNF31Q96EP0 1072 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 WDR77Q9BQA1 342 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-201ENST00000292476 DPH1Q9BZG8 443 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 PPP1R3EQ9H7J1 279 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 NEK6Q9HC98 313 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 TRIM36Q9NQ86 728 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 BABAM2Q9NXR7 383 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 POU2F3Q9UKI9 436 aa15.31■□□□□ 0.04
CPSF4-201ENST00000292476 TRBV11-1A0A0K0K1C0 115 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms