RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZDHHC11Q9H8X9 412 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 TBC1D23Q9NUY8 699 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 TAS2R5Q9NYW4 299 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 IL20Q9NYY1 176 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 SPRR3Q9UBC9 169 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 NPIPA1Q9UND3 350 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 SPIN1Q9Y657 262 aaPredicted RBP8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 CDH10Q9Y6N8 788 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 GTF3C1Q12789 2109 aa8.74□□□□□ -1.01
SNRNP40-201ENST00000263694 TRGV5A0A0B4J1U4 118 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ZAR1LA6NP61 321 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MCIDASD6RGH6 385 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MS4A18H0YCH9 400 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 BCKDKO14874 412 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC16A6O15403 523 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HCN1O60741 890 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RAMP1O60894 148 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SERPINI2O75830 405 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HIST1H2ABP04908 130 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 F13BP05160 661 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CDH2P19022 906 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 GIPRP48546 466 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC9A3P48764 834 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 LHX2P50458 406 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ESRRGP62508 458 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RPL18Q07020 188 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 PMS2P3Q13401 168 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 LY6DQ14210 128 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CTU2Q2VPK5 515 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MS4A18Q3C1V0 323 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 WLSQ5T9L3 541 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SMARCD3Q6STE5 483 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TMPPEQ6ZT21 453 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HIST3H2AQ7L7L0 130 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MAMDC2Q7Z304 686 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SIAH3Q8IW03 269 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CCDC103Q8IW40 242 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CISD2Q8N5K1 135 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TMEM99Q8N816 258 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MFSD8Q8NHS3 518 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 NEIL3Q8TAT5 605 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TEX47Q8TBZ9 253 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC25A43Q8WUT9 341 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 LIPHQ8WWY8 451 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HIST1H2ACQ93077 130 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ABTB1Q969K4 478 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF845Q96IR2 970 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 KLHL15Q96M94 604 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 UCN2Q96RP3 112 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TAPBPLQ9BX59 468 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SRXN1Q9BYN0 137 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 FKRPQ9H9S5 495 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ACKR4Q9NPB9 350 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 QPCTLQ9NXS2 382 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 UBAP1Q9NZ09 502 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF229Q9UJW7 825 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 NDRG4Q9ULP0 352 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RAB26Q9ULW5 256 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 GMPPBQ9Y5P6 360 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 H0YAE9 185 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 PLPP3O14495 311 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 OR2T1O43869 369 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CXCL13O43927 109 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC2A10O95528 541 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 PPP1R3DO95685 299 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 PLGP00747 810 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 IGF2P01344 180 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ADORA3P0DMS8 318 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HLA-DOBP13765 273 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 UQCRC1P31930 480 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 GGT2P36268 569 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HSPA13P48723 471 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 MAP2K6P52564 334 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CLDN18P56856 261 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 NUP107P57740 925 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RPS4XP62701 263 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ERVK-25P63136 954 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CDK5Q00535 292 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 PRR30Q53SZ7 412 aaPredicted RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 SLC35F1Q5T1Q4 408 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HBMQ6B0K9 141 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 C5orf46Q6UWT4 87 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 USP51Q70EK9 711 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 NANOGNBQ7Z5D8 188 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 CHERPQ8IWX8 916 aaKnown RBP8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 LRRC75AQ8NAA5 344 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 OR5J2Q8NH18 312 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 OSTF1Q92882 214 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ADGRG7Q96K78 797 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 HRASLS5Q96KN8 279 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TIMP4Q99727 224 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 IFT27Q9BW83 186 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ASPNQ9BXN1 380 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 RASSF1Q9NS23 344 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 TVP23BQ9NYZ1 205 aa8.73□□□□□ -1.01
SNRNP40-201ENST00000263694 ADAM18Q9Y3Q7 739 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms