RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CYR61O00622 381 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 THBS1P07996 1170 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 ACAA2P42765 397 aaKnown RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 SQSTM1Q13501 440 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 FHL1Q13642 323 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 GRK1Q15835 563 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 CDH24Q86UP0 819 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 PRR22Q8IZ63 422 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 AVL9Q8NBF6 648 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 CAMKVQ8NCB2 501 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 OR11G2Q8NGC1 345 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 OR51A4Q8NGJ6 313 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 FLVCR1-AS1Q8TAF5 88 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 RSC1A1Q92681 617 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 RBM18Q96H35 190 aaKnown RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 BMFQ96LC9 184 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 RANBP3Q9H6Z4 567 aaPredicted RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 HEXA-AS1Q9H8Q6 139 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 HRASLSQ9HDD0 168 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 DNAJB12Q9NXW2 375 aaKnown RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 MRPL39Q9NYK5 338 aaKnown RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 MGAT4CQ9UBM8 478 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 KLF15Q9UIH9 416 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 CDC14CA4D256 554 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 SIGLEC5O15389 551 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 PDGFAP04085 211 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 RLN1P04808 185 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 BDH1Q02338 343 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 SIGLEC14Q08ET2 396 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 MGAT2Q10469 447 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 MELKQ14680 651 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 TPRA1Q86W33 373 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 RNF113BQ8IZP6 322 aaKnown RBP8.36□□□□□ -1.07
MSH4-201ENST00000263187 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 DEFB119Q8N690 84 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 PPP1R14AQ96A00 147 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 ANKRD10Q9NXR5 420 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 SPACA6W5XKT8 324 aa8.36□□□□□ -1.07
MSH4-201ENST00000263187 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SC5DO75845 299 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ARL6IP5O75915 188 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PLGP00747 810 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 CSTAP01040 98 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ST6GAL1P15907 406 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SPI1P17947 270 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PTBP1P26599 531 aaKnown RBP eCLIP8.35□□□□□ -1.07
MSH4-201ENST00000263187 CDKN2AP42771 156 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 CCR9P51686 369 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 KLF9Q13886 244 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 TCTE1Q5JU00 501 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 TMEM69Q5SWH9 247 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 TMPRSS12Q86WS5 348 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PRSS58Q8IYP2 241 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 CA13Q8N1Q1 262 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ADAMTS14Q8WXS8 1223 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 RIT1Q92963 219 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 DVL3Q92997 716 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 NXPE2Q96DL1 559 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 GPR137Q96N19 417 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 NRIP3Q9NQ35 241 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ELF5Q9UKW6 265 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 ERVK-19Q9WJR5 959 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 URADA6NGE7 173 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 TSPAN4O14817 238 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 OIP5O43482 229 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 PLRG1O43660 514 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 NDUFB2O95178 105 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 EGFP01133 1207 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 CDK2P24941 298 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 LCN1P31025 176 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 MMP15P51511 669 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 LINC00303Q3SY05 128 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ARHGAP11AQ6P4F7 1023 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 CBLN3Q6UW01 205 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 HERVK_113Q902F9 699 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 RGP1Q92546 391 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 SLC25A38Q96DW6 304 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SGTBQ96EQ0 304 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ELMOD3Q96FG2 381 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 MED30Q96HR3 178 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ADAD1Q96M93 576 aaKnown RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 MOGAT1Q96PD6 335 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 RBP7Q96R05 134 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 OR2M2Q96R28 347 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 OR1F2PQ96R84 312 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 ZNF436Q9C0F3 470 aaPredicted RBP8.35□□□□□ -1.07
MSH4-201ENST00000263187 NOX3Q9HBY0 568 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 EMC7Q9NPA0 242 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 DUSP22Q9NRW4 184 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 RDH8Q9NYR8 311 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 CHRNA9Q9UGM1 479 aa8.35□□□□□ -1.07
MSH4-201ENST00000263187 SLC6A5Q9Y345 797 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms