RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DNAJC9Q8WXX5 260 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 COG8Q96MW5 612 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TRNT1Q96Q11 434 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC38A2Q96QD8 506 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 RAB9BQ9NP90 201 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TRIM36Q9NQ86 728 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 C14orf105Q9NVL8 296 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF443Q9Y2A4 671 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 V9GYH0 126 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SMIM31A0A1B0GVY4 71 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ANKRD61A6NGH8 418 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SOX14O95416 240 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TMED10P49755 219 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 BRWD1-AS2P59051 145 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ZIK1Q3SY52 487 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 CASP12Q6UXS9 341 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 UNQ6126/PRO20091Q6UXV3 157 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 GALNT5Q7Z7M9 940 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 LRRC25Q8N386 305 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 GALNT6Q8NCL4 622 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 OR2M3Q8NG83 312 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 THAP4Q8WY91 577 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 NSMCE2Q96MF7 247 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 DGCR6LQ9BY27 220 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 DPY30Q9C005 99 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 PITHD1Q9GZP4 211 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SRMSQ9H3Y6 488 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 GPR83Q9NYM4 423 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 WARS2Q9UGM6 360 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ELOVL7A1L3X0 281 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 PDZK1P1A8MUH7 402 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC1A7O00341 560 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TOX3O15405 576 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 YKT6O15498 198 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 MMP7P09237 267 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 PRPS2P11908 318 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 AMY2BP19961 511 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 CMPK1P30085 196 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ARMCX4Q5H9R4 360 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SAMD4BQ5PRF9 694 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 GOLM1Q8NBJ4 401 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 NUP43Q8NFH3 380 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 HDAC2Q92769 488 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 MUL1Q969V5 352 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SERINC2Q96SA4 455 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 KCNK17Q96T54 332 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF184Q99676 751 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TSPAN10Q9H1Z9 355 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 RYDENQ9NUL5 291 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC9A8Q9Y2E8 581 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ENPP4Q9Y6X5 453 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A1B0GWA3 101 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ABCB7O75027 752 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TMCC2O75069 709 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 IL33O95760 270 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SERPIND1P05546 499 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 SLC35G4P0C7Q5 338 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 HOXC12P31275 282 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 RPS15AP62244 130 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 NKAIN1Q4KMZ8 207 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 DMRTC1Q5HYR2 192 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 DCST2Q5T1A1 773 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 OR2G6Q5TZ20 316 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 ZNF730Q6ZMV8 503 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 RBM12BQ8IXT5 1001 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 METTL21AQ8WXB1 218 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 AP3S1Q92572 193 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 HAVCR1Q96D42 359 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 LCORQ96JN0 433 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 KCNS3Q9BQ31 491 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 AIF1LQ9BQI0 150 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 C9orf16Q9BUW7 83 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 JAM3Q9BX67 310 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 STRADBQ9C0K7 418 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 MMP25Q9NPA2 562 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 FBXL3Q9UKT7 428 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 TCFL5Q9UL49 500 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 HIF3AQ9Y2N7 669 aa4.99□□□□□ -1.61
TOPBP1-201ENST00000260810 A0A0J9YW62 118 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 FAAHO00519 579 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 LDLRAD4O15165 306 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CDK4P11802 303 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CTLA4P16410 223 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 KIR3DL2P43630 455 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 HSF1Q00613 529 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 LRRC23Q53EV4 343 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 TRIM40Q6P9F5 258 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 IGFN1Q86VF2 1251 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 IFNEQ86WN2 208 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 FAM98AQ8NCA5 519 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 GLB1L3Q8NCI6 653 aaPredicted RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CPEB3Q8NE35 698 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 OR13C2Q8NGS9 318 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 B4GALNT2Q8NHY0 566 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 KCTD12Q96CX2 325 aaKnown RBP4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 NEDD4LQ96PU5 975 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 DEPDC7Q96QD5 511 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 PANX1Q96RD7 426 aa4.98□□□□□ -1.61
TOPBP1-201ENST00000260810 CSPG4Q6UVK1 2322 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms