RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 CPED1A4D0V7 1026 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LILRB3O75022 631 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LDB3O75112 727 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR2C1O95371 312 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ADH1BP00325 375 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SERPINE2P07093 398 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ACHEP22303 614 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 IGFBP6P24592 240 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 CCR9P51686 369 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 EMP2P54851 167 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZBTB37Q5TC79 503 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 RPL22L1Q6P5R6 122 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC35F3Q8IY50 421 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMEM156Q8N614 296 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZSCAN4Q8NAM6 433 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 NLGN4YQ8NFZ3 816 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR6F1Q8NGZ6 308 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 KLF16Q9BXK1 252 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.961e-6■■■■□ 21.5
CTDSPL2-201ENST00000260327 INPP5EQ9NRR6 644 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 MBP02144 154 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ATP1B1P05026 303 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CPN1P15169 458 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CD1EP15812 388 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPI1P17947 270 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CD80P33681 288 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RPS18P62269 152 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NTHL1P78549 312 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 TSPAN31Q12999 210 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 LINC00299Q6ZSB3 139 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NANOGP1Q8N7R0 232 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 TAAR8Q969N4 342 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NICN1Q9BSH3 213 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 FN3KRPQ9HA64 309 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CPNE7Q9UBL6 633 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 DCTN6O00399 190 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NME2P1O60361 137 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NSA2O95478 260 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PNMTP11086 282 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PGCP20142 388 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ELAVL4P26378 380 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ETV6P41212 452 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR1Q1Q15612 314 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 LIPIQ6XZB0 460 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RHOUQ7L0Q8 258 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 MCATQ8IVS2 390 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR7D2Q96RA2 312 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CHRDQ9H2X0 955 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ELOVL3Q9HB03 270 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ASB1Q9Y576 335 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 H0Y8G0 127 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 H7C1C5 153 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PMP2P02689 132 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 FABP1P07148 127 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF84P51523 738 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 LCN6P62502 163 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 FAM111BQ6SJ93 734 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ESPNLQ6ZVH7 1005 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMED6Q8WW62 240 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RNF170Q96K19 258 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 TXN2Q99757 166 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PELI2Q9HAT8 420 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF443Q9Y2A4 671 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PRELID3BQ9Y3B1 194 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 DDX60LQ5H9U9 1706 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CD300LBA8K4G0 201 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 F5H5K5 113 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RNGTTO60942 597 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 MGST1P10620 155 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NQO2P16083 231 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SIRPAP78324 504 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ADIRFQ15847 76 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NXNL2Q5VZ03 156 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RAB39BQ96DA2 213 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPACA1Q9HBV2 294 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ACSS1Q9NUB1 689 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SAGE1Q9NXZ1 904 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SHROOM3Q8TF72 1996 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 HHLA1C9JL84 531 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 AK1P00568 194 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 GIPP09681 153 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SBK3P0C264 359 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 KIR2DL3P43628 341 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 CLDN20P56880 219 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RPL23AP62750 156 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ACTBL2Q562R1 376 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF704Q6ZNC4 412 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 BAGE2Q86Y30 109 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR1M1Q8NGA1 313 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR52I2Q8NH67 350 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 RBMXL1Q96E39 390 aaKnown RBP9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 NIPSNAP3BQ9BS92 247 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 HCFC1R1Q9NWW0 138 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC6A14Q9UN76 642 aa9.06□□□□□ -0.96
CTDSPL2-201ENST00000260327 PKD1L3Q7Z443 1732 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms