RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LILRB4Q8NHJ6 448 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 SLC35B4Q969S0 331 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 ZNF845Q96IR2 970 aaPredicted RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 ADGRG7Q96K78 797 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 KLHL15Q96M94 604 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 SERINC1Q9NRX5 453 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 DCAF13Q9NV06 445 aaKnown RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 PAQR5Q9NXK6 330 aaPredicted RBP15.05■□□□□ -0
SDCBP-201ENST00000260130 SH3GLB1Q9Y371 365 aa15.05■□□□□ -0
SDCBP-201ENST00000260130 PHF3Q92576 2039 aaKnown RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 FAM220BPB1ANY3 271 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 M0QX08 132 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 TNFSF11O14788 317 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 GCM2O75603 506 aaPredicted RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 PRKD3O94806 890 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 MFN2O95140 757 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 TGM6O95932 706 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 SHC1P29353 583 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 HTR3AP46098 478 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 RAD23AP54725 363 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 TMEM176BQ3YBM2 270 aaPredicted RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 PDSS1Q5T2R2 415 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 POMZP3Q6PJE2 187 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 OR10D3Q8NH80 312 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 OR2V1Q8NHB1 315 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 REXO5Q96IC2 774 aaKnown RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 AMBRA1Q9C0C7 1298 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 PLEKHB1Q9UF11 243 aaPredicted RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 NCOA6Q14686 2063 aaPredicted RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 PCNX1Q96RV3 2341 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 HEATR5AQ86XA9 2040 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 LOC100130705A0A1B0GUX0 176 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 SLC22A20A6NK97 555 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 E2F6O75461 281 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 RCBTB2O95199 551 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 OCM2P0CE71 109 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 OCMP0CE72 109 aaPredicted RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 SLC1A3P43003 542 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 IST1P53990 364 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 HBMQ6B0K9 141 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 C3orf33Q6P1S2 294 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 ERICH5Q6P6B1 374 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 DCDC5Q6ZRR9 648 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 P4HA3Q7Z4N8 544 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 HIPK1Q86Z02 1210 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 CTPS2Q9NRF8 586 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 WARS2Q9UGM6 360 aaKnown RBP15.04■□□□□ -0
SDCBP-201ENST00000260130 ZNF175Q9Y473 711 aa15.04■□□□□ -0
SDCBP-201ENST00000260130 PRG2P13727 222 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 CARD18P57730 90 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 COPZ1P61923 177 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 VEZF1Q14119 521 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 PON3Q15166 354 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 LIX1LQ8IVB5 337 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 OSTF1Q92882 214 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 MUL1Q969V5 352 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 ZNF629Q9UEG4 869 aaPredicted RBP15.03■□□□□ -0
SDCBP-201ENST00000260130 BAG5Q9UL15 447 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 KLF2Q9Y5W3 355 aaPredicted RBP15.03■□□□□ -0
SDCBP-201ENST00000260130 ASH1LQ9NR48 2969 aaKnown RBP15.03■□□□□ -0
SDCBP-201ENST00000260130 PTPN13Q12923 2485 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 HECTD1Q9ULT8 2610 aa15.03■□□□□ -0
SDCBP-201ENST00000260130 FRS3O43559 492 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 CXCL13O43927 109 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 ZNF136P52737 540 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 CD47Q08722 323 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 ZNF691Q5VV52 312 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 CCDC80Q76M96 950 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 ADGRG3Q86Y34 549 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 FNDC9Q8TBE3 224 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 CHPT1Q8WUD6 406 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 ZFP3Q96NJ6 502 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 ADAM19Q9H013 955 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 CHRNA9Q9UGM1 479 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 OSGIN1Q9UJX0 560 aa15.02■□□□□ -0
SDCBP-201ENST00000260130 SPIN1Q9Y657 262 aaPredicted RBP15.02■□□□□ -0
SDCBP-201ENST00000260130 SLC16A6O15403 523 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 HTR1AP08908 422 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 CCDC159P0C7I6 412 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 TMIGD3P0DMS9 266 aaPredicted RBP15.02□□□□□ -0.01
SDCBP-201ENST00000260130 CTSSP25774 331 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 FKBP2P26885 142 aaKnown RBP15.02□□□□□ -0.01
SDCBP-201ENST00000260130 TACR3P29371 465 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 POLR2HP52434 150 aaKnown RBP15.02□□□□□ -0.01
SDCBP-201ENST00000260130 WBP2NLQ6ICG8 309 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 COMTD1Q86VU5 262 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 HS3ST5Q8IZT8 346 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 CENPSQ8N2Z9 138 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 CADM2Q8N3J6 435 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 SLC25A43Q8WUT9 341 aaPredicted RBP15.02□□□□□ -0.01
SDCBP-201ENST00000260130 INTS12Q96CB8 462 aaKnown RBP15.02□□□□□ -0.01
SDCBP-201ENST00000260130 BCL7BQ9BQE9 202 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 FUNDC2Q9BWH2 189 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 UCK2Q9BZX2 261 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 KCNJ16Q9NPI9 418 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 TIGARQ9NQ88 270 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 KLHL28Q9NXS3 571 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 ENPP5Q9UJA9 477 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 SLC13A4Q9UKG4 626 aa15.02□□□□□ -0.01
SDCBP-201ENST00000260130 SPTBN1Q01082 2364 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms