RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TCF7L2Q9NQB0 619 aa16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 FBN1P35555 2871 aaKnown RBP16.63■□□□□ 0.25
TM6SF1-201ENST00000258909 C5orf58C9J3I9 102 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 ATP6V1G2-DDX39BF2Z307 99 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 POLR3GO15318 223 aaPredicted RBP16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 GPRIN2O60269 458 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 CRLF1O75462 422 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 AHSA1O95433 338 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 TP53P04637 393 aaPredicted RBP16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 RPS5P46782 204 aaKnown RBP16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 IDH3AP50213 366 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 STX1BP61266 288 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 EGR4Q05215 589 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 ZSWIM7Q19AV6 140 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 NIPAL3Q6P499 406 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 KLHL24Q6TFL4 600 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 LINGO2Q7L985 606 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 EPHX4Q8IUS5 362 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 MSRB3Q8IXL7 192 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 NFKBIDQ8NI38 313 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 BBS10Q8TAM1 723 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 ALKBH3Q96Q83 286 aaPredicted RBP16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 RHNO1Q9BSD3 238 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 PRR14Q9BWN1 585 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 BCL2L10Q9HD36 194 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 CCDC167Q9P0B6 97 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 SEC14L4Q9UDX3 406 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 MOKQ9UQ07 419 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 RTTNQ86VV8 2226 aa16.62■□□□□ 0.25
TM6SF1-201ENST00000258909 A0A096LPI6 279 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 NR5A2O00482 541 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 UPK3AO75631 287 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 BMP2P12643 396 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 RAB35Q15286 201 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 PAGE3Q5JUK9 113 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 COMTD1Q86VU5 262 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 GOLGA6L1Q8N7Z2 621 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 STK35Q8TDR2 534 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 KTI12Q96EK9 354 aaPredicted RBP16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 C7orf26Q96N11 449 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 PTDSS2Q9BVG9 487 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 RAD21L1Q9H4I0 556 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 FKRPQ9H9S5 495 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 YAE1D1Q9NRH1 226 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 TMEM45AQ9NWC5 275 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 FTCDNL1E5RQL4 147 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 VAMP5O95183 116 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 PNMTP11086 282 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 TUBA1BP68363 451 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 TUBA4AP68366 448 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 FADDQ13158 208 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 TBRG1Q3YBR2 411 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 ARFGEF3Q5TH69 2177 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 AGBL2Q5U5Z8 902 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 ZNF544Q6NX49 715 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 BLOC1S3Q6QNY0 202 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 TUBA1AQ71U36 451 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 ZNF525Q8N782 197 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 OR1K1Q8NGR3 316 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 MFSD8Q8NHS3 518 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 LRRC8CQ8TDW0 803 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 SPDL1Q96EA4 605 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 RPS6KB2Q9UBS0 482 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 RASD1Q9Y272 281 aa16.61■□□□□ 0.25
TM6SF1-201ENST00000258909 A0A096LPE4 126 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 A0A1W2PPZ6 126 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 ZNF587BE7ETH6 402 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 LY6HO94772 140 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 WNT11O96014 354 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 AQP5P55064 265 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 GLIPR1L2Q4G1C9 344 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 LRIF1Q5T3J3 769 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 GCNT6Q5T4J0 391 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 CLEC2AQ6UVW9 174 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 ABHD12BQ7Z5M8 362 aaPredicted RBP16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 PIF1Q9H611 641 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 VAPAQ9P0L0 249 aa16.6■□□□□ 0.25
TM6SF1-201ENST00000258909 CUBNO60494 3623 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 MXRA5Q9NR99 2828 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 IGHV1-18A0A0C4DH31 117 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 CD5LO43866 347 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 TPST1O60507 370 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 CBLP22681 906 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 HTR2AP28223 471 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 GTF2E2P29084 291 aaKnown RBP16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 APOBEC3AP31941 199 aaPredicted RBP16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 MRPL19P49406 292 aaKnown RBP16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 CLDN17P56750 224 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 OR10H5Q8NGA6 315 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 TAAR8Q969N4 342 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 FBXO17Q96EF6 278 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 SLC52A3Q9NQ40 469 aa16.59■□□□□ 0.25
TM6SF1-201ENST00000258909 YLPM1P49750 1951 aaKnown RBP16.58■□□□□ 0.25
TM6SF1-201ENST00000258909 A0A1B0GWA3 101 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 TGDSO95455 350 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms