RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ERI1Q8IV48 349 aaKnown RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PROKR2Q8NFJ6 384 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 SLC25A43Q8WUT9 341 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 UBE2FQ969M7 185 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 C8orf44Q96CB5 159 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 SNX18Q96RF0 628 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 MND1Q9BWT6 205 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 DSN1Q9H410 356 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PTGES2Q9H7Z7 377 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 METTL7AQ9H8H3 244 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 ISYNA1Q9NPH2 558 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 NANSQ9NR45 359 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 CHCHD3Q9NX63 227 aaKnown RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 PPP4R1LQ9P1A2 415 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 TEKT2Q9UIF3 430 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 CORINQ9Y5Q5 1042 aa11.97□□□□□ -0.49
SLIRP-201ENST00000238688 USP9YO00507 2555 aaPredicted RBP11.97□□□□□ -0.49
SLIRP-201ENST00000238688 IGKV1D-42A0A075B6H8 117 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 TMEM129A0AVI4 362 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NPIPB13A6NJU9 1138 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NPIPB4C9JG80 1138 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 WWP2O00308 870 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ADAM10O14672 748 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NPIPB7O75200 414 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ITGA10O75578 1167 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NUDT14O95848 222 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 HIST1H2ABP04908 130 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ASAH2BP0C7U1 165 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 MYL12AP19105 171 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 FUT1P19526 365 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 CD97P48960 835 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 CENPAP49450 140 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-201ENST00000238688 MLLT10P55197 1068 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 CDH11P55287 796 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 MLF1P58340 268 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-201ENST00000238688 LGALS3BPQ08380 585 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 QPRTQ15274 297 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 FAM69AQ5T7M9 428 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 LINC00299Q6ZSB3 139 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 HIST3H2AQ7L7L0 130 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 MAMDC2Q7Z304 686 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-201ENST00000238688 RPS19BP1Q86WX3 136 aaKnown RBP11.96□□□□□ -0.49
SLIRP-201ENST00000238688 CLVS1Q8IUQ0 354 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-201ENST00000238688 SCAIQ8N9R8 606 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 PSD4Q8NDX1 1056 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 FDCSPQ8NFU4 85 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 OR13C2Q8NGS9 318 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 OR4Q3Q8NH05 313 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ASB15Q8WXK1 588 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 HIST1H2ACQ93077 130 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ISOC1Q96CN7 298 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NTNG2Q96CW9 530 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 COG8Q96MW5 612 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 IFT27Q9BW83 186 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 POTEKPQ9BYX7 375 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 LHPPQ9H008 270 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 MCCC2Q9HCC0 563 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 ATP13A2Q9NQ11 1180 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 NRIP3Q9NQ35 241 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 GPR83Q9NYM4 423 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 KLRF1Q9NZS2 232 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 OSGIN1Q9UJX0 560 aa11.96□□□□□ -0.49
SLIRP-201ENST00000238688 PRRC2CQ9Y520 2896 aaKnown RBP11.96□□□□□ -0.5
SLIRP-201ENST00000238688 PRR23D1E9PI22 279 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 H3BSA7 217 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 KPNA4O00629 521 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SLC22A1O15245 554 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SCO2O43819 266 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SNX4O95219 450 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 NTN1O95631 604 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 TXNDC12O95881 172 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 PRR23D2P0DMB1 279 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 MST1P26927 711 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 NOS3P29474 1203 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 GSTT1P30711 240 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 FBXW4P57775 412 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 FXYD6P3P58550 94 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 FOXD4Q12950 439 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 ATP1A4Q13733 1029 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 NDUFAF6Q330K2 333 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SLC35D3Q5M8T2 416 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 CLEC12AQ5QGZ9 265 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 LCN1P1Q5VSP4 162 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 CXXC5Q7LFL8 322 aaKnown RBP11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SLC46A3Q7Z3Q1 461 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 IQCF1Q8N6M8 205 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 GATSQ8NAP1 163 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 PAQR8Q8TEZ7 354 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 DUSP19Q8WTR2 217 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 ZBTB8AQ96BR9 441 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SERINC1Q9NRX5 453 aa11.95□□□□□ -0.5
SLIRP-201ENST00000238688 SACM1LQ9NTJ5 587 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms