RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 SCN2BO60939 215 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 AGR2O95994 175 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 GUSBP08236 651 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 ADRA2AP08913 450 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 PRPS1L1P21108 318 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 TACR3P29371 465 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 MAP2K6P52564 334 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 HGFACQ04756 655 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 OR7A5Q15622 319 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 C3orf36Q3SXR2 165 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 ATP6AP1LQ52LC2 224 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 C6orf136Q5SQH8 315 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 AP1ARQ63HQ0 302 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 HMGN2P46Q86SG4 172 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 LSRQ86X29 649 aaPredicted RBP7.18□□□□□ -1.26
IFT43-201ENST00000238628 C10orf107Q8IVU9 208 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 C17orf53Q8N3J3 647 aaPredicted RBP7.18□□□□□ -1.26
IFT43-201ENST00000238628 BPIFB2Q8N4F0 458 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 CKAP2Q8WWK9 683 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 RAB8BQ92930 207 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 ROPN1LQ96C74 230 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 SLC6A7Q99884 636 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 PIF1Q9H611 641 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 ZNF442Q9H7R0 627 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 SEC61A2Q9H9S3 476 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 EXOSC3Q9NQT5 275 aaKnown RBP7.18□□□□□ -1.26
IFT43-201ENST00000238628 POLE3Q9NRF9 147 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 HIF1ANQ9NWT6 349 aa7.18□□□□□ -1.26
IFT43-201ENST00000238628 RNF103-CHMP3A0A140T963 221 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 ZC3H12DA2A288 527 aaKnown RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 OR6C65A6NJZ3 312 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 AQP7P3A6NL99 342 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CLDN24A6NM45 220 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 M0QZ24 198 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 COPEO14579 308 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 AP3D1O14617 1153 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 UPK3AO75631 287 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CPSF4O95639 269 aaKnown RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 IGLV1-44P01699 117 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 GPIP06744 558 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CHRNGP07510 517 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CBR1P16152 277 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CXCR1P25024 350 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 COL8A2P25067 703 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 GPR6P46095 362 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 SELENOPP49908 381 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 KHKP50053 298 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 IL1RL1Q01638 556 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 DAG1Q14118 895 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 GPAT3Q53EU6 434 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 OR4F3Q6IEY1 312 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 FAHD2BQ6P2I3 314 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 NIPAL3Q6P499 406 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 TNFAIP8L2Q6P589 184 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 FRRS1Q6ZNA5 592 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CREB3L2Q70SY1 520 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 RIMKLAQ8IXN7 391 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CLECL1Q8IZS7 167 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 TEX29Q8N6K0 151 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 FAM169BQ8N8A8 192 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 FNDC5Q8NAU1 212 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 NOA1Q8NC60 698 aaKnown RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 OR4A15Q8NGL6 344 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CLDND2Q8NHS1 167 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 AGR3Q8TD06 166 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 MIPOL1Q8TD10 442 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 MAGEE2Q8TD90 523 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 CNOT9Q92600 299 aaKnown RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 FAHD2AQ96GK7 314 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 C3orf30Q96M34 536 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 ZNF317Q96PQ6 595 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 TAPBPLQ9BX59 468 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 TPK1Q9H3S4 243 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 NARFLQ9H6Q4 476 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 LPAR2Q9HBW0 351 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 MOV10Q9HCE1 1003 aaKnown RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 PDP1Q9P0J1 537 aaPredicted RBP7.17□□□□□ -1.26
IFT43-201ENST00000238628 MID2Q9UJV3 735 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 CMYA5Q8N3K9 4069 aa7.17□□□□□ -1.26
IFT43-201ENST00000238628 LIPT2A6NK58 231 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 VAMP5O95183 116 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 IGKV3-15P01624 115 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 PRB2P02812 416 aaPredicted RBP7.16□□□□□ -1.26
IFT43-201ENST00000238628 MSMBP08118 114 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 IGFBP1P08833 259 aaPredicted RBP7.16□□□□□ -1.26
IFT43-201ENST00000238628 CELA3BP08861 270 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 G6PDP11413 515 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 UQCRBP14927 111 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 UQCRC2P22695 453 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 ARR3P36575 388 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 CLDN8P56748 225 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 HPCAP84074 193 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 ARF1P84077 181 aaKnown RBP7.16□□□□□ -1.26
IFT43-201ENST00000238628 PLAURQ03405 335 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 PCLAFQ15004 111 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 GSTA3Q16772 222 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 WHAMMP3Q1A5X7 153 aa7.16□□□□□ -1.26
IFT43-201ENST00000238628 SLC9B1Q4ZJI4 515 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms