RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 ELP5Q8TE02 316 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 DCUN1D4Q92564 292 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SMIM19Q96E16 107 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 WBP1Q96G27 269 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 LMF1Q96S06 567 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 APMAPQ9HDC9 416 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SIRT3Q9NTG7 399 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SLC27A6Q9Y2P4 619 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 KCNK7Q9Y2U2 307 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 FAM96BQ9Y3D0 163 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 FNDC1Q4ZHG4 1894 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 M0QYG6 137 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CTDSPLO15194 276 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PPM1DO15297 605 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 B4GALT2O60909 372 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 LY86O95711 162 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 TPT1P13693 172 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 NQO2P16083 231 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CERS1P27544 350 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PPIAP62937 165 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 AGERQ15109 404 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 TEAD2Q15562 447 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SMAD2Q15796 467 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 USF2Q15853 346 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ZNF425Q6IV72 752 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ADAM5Q6NVV9 412 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 RPL22L1Q6P5R6 122 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 TMEM205Q6UW68 189 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SSX9Q7RTT3 188 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SLC35F2Q8IXU6 374 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PHOSPHO1Q8TCT1 267 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 DIO2Q92813 273 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ZBTB8AQ96BR9 441 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PEX11GQ96HA9 241 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SLC22A12Q96S37 553 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ZNF559Q9BR84 538 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 RHBGQ9H310 441 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 GHRLQ9UBU3 117 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ZNF230Q9UIE0 474 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CLEC4EQ9ULY5 219 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR6C65A6NJZ3 312 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SCAMP1O15126 338 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 EMC8O43402 210 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ZNF432O94892 652 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR2F2O95006 317 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CYB5AP00167 134 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CD3DP04234 171 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PRKAR2AP13861 404 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SPI1P17947 270 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PTAFRP25105 342 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 MAPK3P27361 379 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 PSMB5P28074 263 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 SLC6A6P31641 620 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR2B8PP59922 312 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR2F1Q13607 317 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 MRPL58Q14197 206 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 COL19A1Q14993 1142 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 FAM109BQ6ICB4 259 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 LNX2Q8N448 690 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR5AR1Q8NGP9 310 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 OR9A2Q8NGT5 310 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 STK35Q8TDR2 534 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 TFGQ92734 400 aaPredicted RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 ADAD1Q96M93 576 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CHST6Q9GZX3 395 aa9.28□□□□□ -0.92
CLDN18-201ENST00000183605 CCDC86Q9H6F5 360 aaKnown RBP9.28□□□□□ -0.92
CLDN18-201ENST00000183605 IGLV3-16A0A075B6K0 115 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 DUXAA6NLW8 204 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 RHPN2P1A8MT19 583 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 BCL2L11O43521 198 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 EFNB1P98172 346 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 DHODHQ02127 395 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 POU4F2Q12837 409 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 STEAP1BQ6NZ63 245 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 GAREM2Q75VX8 874 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 ASPGQ86U10 573 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 TRAM1L1Q8N609 369 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 SYT4Q9H2B2 425 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 FBXO4Q9UKT5 387 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 FOXJ3Q9UPW0 622 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 SLC22A7Q9Y694 548 aa9.27□□□□□ -0.92
CLDN18-201ENST00000183605 ALPK2Q86TB3 2170 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 NPIPA5A0A0B4J1W7 369 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 NPIPA7E9PJI5 369 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 KIAA0355O15063 1070 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 ZNF208O43345 1280 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 IFNA6P05013 189 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 NPIPA8P0DM63 369 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 ITGA3P26006 1051 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 SDHAP31040 664 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 EPHB3P54753 998 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 CDKN3Q16667 212 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 AMZ1Q400G9 498 aa9.27□□□□□ -0.93
CLDN18-201ENST00000183605 RNF212Q495C1 297 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms