RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 TMEM231Q9H6L2 316 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 C12orf10Q9HB07 376 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 MED11Q9P086 117 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 KCNE5Q9UJ90 142 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 LHX6Q9UPM6 363 aa15.4■□□□□ 0.06
CTDP1-201ENST00000075430 C1QTNF3-AMACRE9PGA6 284 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 EFEMP2O95967 443 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ZNF136P52737 540 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 H2BFSP57053 126 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ZNF169Q14929 603 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TMEM44Q2T9K0 475 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SEZ6L2Q6UXD5 910 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 VITQ6UXI7 678 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 METTL27Q8N6F8 245 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 OR10K1Q8NGX5 313 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 FAM174AQ8TBP5 190 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SMARCD2Q92925 531 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 LRRC46Q96FV0 321 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 Q96M85 177 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ADAD1Q96M93 576 aaKnown RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 CMC2Q9NRP2 79 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 LYARQ9NX58 379 aaKnown RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 CALML5Q9NZT1 146 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 KIF26AQ9ULI4 1882 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3DA0A087WVF3 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3IA0A087WXS9 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3EA0A087X179 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3KA0A087X1G2 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3FA6NER0 549 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3LB9A6J9 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SDC3O75056 442 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 CLEC3AO75596 197 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 IFNGP01579 166 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3HP0C7X1 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 NDUFS1P28331 727 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 P2RY2P41231 377 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SHC2P98077 582 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 DCST2Q5T1A1 773 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3GQ6DHY5 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 OR10K2Q6IF99 312 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 OR7E24Q6IFN5 339 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3CQ6IPX1 549 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TBC1D3Q8IZP1 549 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TMEM185AQ8NFB2 350 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 OR4K14Q8NGD5 310 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 HHIPL1Q96JK4 782 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TOX2Q96NM4 488 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SERGEFQ9UGK8 458 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 MLXQ9UH92 298 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SIGLEC7Q9Y286 467 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ZFPL1O95159 310 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 NAGAP17050 411 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 P2RX1P51575 399 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 GAS6Q14393 721 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ELAVL3Q14576 367 aaKnown RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 HNRNPA1L2Q32P51 320 aaKnown RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 DMRTC1Q5HYR2 192 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 UNQ6126/PRO20091Q6UXV3 157 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 TPRA1Q86W33 373 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 GLB1L2Q8IW92 636 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 CCL4L1Q8NHW4 92 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 PPP1R14AQ96A00 147 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 SLC25A28Q96A46 364 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 CNN2Q99439 309 aaKnown RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 PELI2Q9HAT8 420 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 C2orf42Q9NWW7 574 aa15.39■□□□□ 0.05
CTDP1-201ENST00000075430 ARHGEF17Q96PE2 2063 aaPredicted RBP15.39■□□□□ 0.05
CTDP1-201ENST00000075430 A0A1B0GWA3 101 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 PIN1P1O15428 100 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 VSIG10L2P0DP72 767 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 C4BPBP20851 252 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 CDK5R1Q15078 307 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 NRROSQ86YC3 692 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 GJD3Q8N144 294 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 SPPL3Q8TCT6 385 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ZNF75AQ96N20 296 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 UBL7Q96S82 380 aaPredicted RBP15.38■□□□□ 0.05
CTDP1-201ENST00000075430 PCDHB16Q9NRJ7 776 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 SLC39A1Q9NY26 324 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 PIPOXQ9P0Z9 390 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 V9GY05 133 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 BRWD1Q9NSI6 2320 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 DUXAA6NLW8 204 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 RBBP9O75884 186 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 PTBP1P26599 531 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTDP1-201ENST00000075430 NANOS3P60323 173 aaKnown RBP15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ZNF273Q14593 569 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 METRNLQ641Q3 311 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 PAQR7Q86WK9 346 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 OR51A4Q8NGJ6 313 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ACTR6Q9GZN1 396 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 NOTCH4Q99466 2003 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 EDDM13A0A1B0GTR0 161 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ELOA3DA6NLF2 546 aaPredicted RBP15.38■□□□□ 0.05
CTDP1-201ENST00000075430 OR10H2O60403 315 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ADAM11O75078 769 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ELOA3BQ3SY89 546 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 FAM78AQ5JUQ0 283 aa15.38■□□□□ 0.05
CTDP1-201ENST00000075430 MUC20Q8N307 709 aaPredicted RBP15.38■□□□□ 0.05
CTDP1-201ENST00000075430 ELOA3Q8NG57 546 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms