RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 OR13F1Q8NGS4 319 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 APH1BQ8WW43 257 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 TSC22D3Q99576 134 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 WDR77Q9BQA1 342 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 ADAM19Q9H013 955 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 CTPS2Q9NRF8 586 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 PTTG2Q9NZH5 202 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 ERGIC3Q9Y282 383 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 KLF2Q9Y5W3 355 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 IGHV1-45A0A0A0MS14 117 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 CENPVL1A0A0U1RR11 272 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 IMPA2O14732 288 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 OR2T1O43869 369 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 NDUFB2O95178 105 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 FADS2O95864 444 aaKnown RBP15.62■□□□□ 0.09
PHGDH-234ENST00000642041 THY1P04216 161 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 TP53P04637 393 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-234ENST00000642041 CXCR1P25024 350 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 CDH15P55291 814 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 DLX5P56178 289 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 C1DQ13901 141 aaKnown RBP15.62■□□□□ 0.09
PHGDH-234ENST00000642041 TIMM50Q3ZCQ8 353 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 UBE2UQ5VVX9 321 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 FAAH2Q6GMR7 532 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 LAIR2Q6ISS4 152 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 ARHGAP11AQ6P4F7 1023 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 GRINAQ7Z429 371 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 ARMC10Q8N2F6 343 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 TMCO5AQ8N6Q1 288 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF321PQ8N8H1 164 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 B4GALNT2Q8NHY0 566 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 STK35Q8TDR2 534 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 ADAMTS17Q8TE56 1095 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 GGHQ92820 318 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 MUL1Q969V5 352 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 TMEM80Q96HE8 168 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 OR52D1Q9H346 318 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 AKIRIN1Q9H9L7 192 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-234ENST00000642041 KLHL21Q9UJP4 597 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 OSGIN2Q9Y236 505 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 FARSAQ9Y285 508 aaKnown RBP15.62■□□□□ 0.09
PHGDH-234ENST00000642041 MYO7BQ6PIF6 2116 aa15.62■□□□□ 0.09
PHGDH-234ENST00000642041 NSG1A0A0A6YYJ2 146 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 A6NL46 340 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HCRTR2O43614 444 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 TLX2O43763 284 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 XPNPEP2O43895 674 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 ICOSLGO75144 302 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 PTP4A3O75365 173 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SLC25A12O75746 678 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 KLF7O75840 302 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HIST1H2ABP04908 130 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 FBXO45P0C2W1 286 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 PEPDP12955 493 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HK1P19367 917 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SLC15A1P46059 708 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HOXC5Q00444 222 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 EMX1Q04741 257 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 RAB39AQ14964 217 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 NNATQ16517 81 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 PGGHGQ32M88 737 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SLC30A6Q6NXT4 461 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 DPY19L2P2Q6ZN68 376 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HIST3H2AQ7L7L0 130 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 RAB43Q86YS6 212 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 ERI1Q8IV48 349 aaKnown RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 TCEANCQ8N8B7 351 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 FANK1Q8TC84 345 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 RNF138Q8WVD3 245 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 HIST1H2ACQ93077 130 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 C3orf49Q96BT1 292 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 MRPL48Q96GC5 212 aaKnown RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 IMMP1LQ96LU5 166 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SIGLEC11Q96RL6 698 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 DOK1Q99704 481 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 RBM38Q9H0Z9 239 aaKnown RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 FLRT3Q9NZU0 649 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SIGLEC7Q9Y286 467 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 NTNG1Q9Y2I2 539 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 SPIN1Q9Y657 262 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-234ENST00000642041 CEPT1Q9Y6K0 416 aa15.61■□□□□ 0.09
PHGDH-234ENST00000642041 IGLV3-32A0A0A0MS00 114 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 RIIAD1A6NNX1 92 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ARPC3O15145 178 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 SOX14O95416 240 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 HPP00738 406 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 MYL12AP19105 171 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 PCMT1P22061 227 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 APOBEC1P41238 236 aaKnown RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 POLR2HP52434 150 aaKnown RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 CRYZQ08257 329 aaKnown RBP15.6■□□□□ 0.09
PHGDH-234ENST00000642041 LGALS3BPQ08380 585 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 ST3GAL4Q11206 333 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 POU4F2Q12837 409 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 PMS2P3Q13401 168 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 PCOLCEQ15113 449 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 NEDD8Q15843 81 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 NTRK2Q16620 822 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 BTBD16Q32M84 506 aa15.6■□□□□ 0.09
PHGDH-234ENST00000642041 EMC4Q5J8M3 183 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms