RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PNMTP11086 282 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 GLB1P16278 677 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 ELK1P19419 428 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 CDKN2AP42771 156 aaKnown RBP15.47■□□□□ 0.07
PHGDH-229ENST00000641891 GRK6P43250 576 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 DIO1P49895 249 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 NR0B1P51843 470 aaKnown RBP15.47■□□□□ 0.07
PHGDH-229ENST00000641891 ZNF117Q03924 483 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 PON3Q15166 354 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.47■□□□□ 0.075e-8■■■□□ 19.2
PHGDH-229ENST00000641891 LEG1Q6P5S2 330 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 Q8N402 240 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 ZNF563Q8TA94 476 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 KTI12Q96EK9 354 aaPredicted RBP15.47■□□□□ 0.07
PHGDH-229ENST00000641891 LRFN5Q96NI6 719 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 DPYSL5Q9BPU6 564 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 SLC22A4Q9H015 551 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 WNT16Q9UBV4 365 aa15.47■□□□□ 0.07
PHGDH-229ENST00000641891 ARPC3O15145 178 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SC5DO75845 299 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 F13BP05160 661 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 OR2T7P0C7T2 308 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SLC2A2P11168 524 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 TACR3P29371 465 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 THBS2P35442 1172 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 NKX2-5P52952 324 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 NRG3P56975 720 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 TOMM34Q15785 309 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 ACSM3Q53FZ2 586 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 HBMQ6B0K9 141 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 POMZP3Q6PJE2 187 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 LANCL3Q6ZV70 420 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 MARCH3Q86UD3 253 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 POMGNT2Q8NAT1 580 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 OR2T27Q8NH04 317 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SHDQ96IW2 340 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SLC41A2Q96JW4 573 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 TSSK2Q96PF2 358 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 NMNAT2Q9BZQ4 307 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 VN1R1Q9GZP7 353 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 EXOSC3Q9NQT5 275 aaKnown RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 NANSQ9NR45 359 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 ACOXLQ9NUZ1 547 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 CTSFQ9UBX1 484 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 GNG8Q9UK08 70 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 MKL2Q9ULH7 1088 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 A0A0G2JK05 382 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 K7ESF4 209 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 PSMD9O00233 223 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 KHNYNO15037 678 aaKnown RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SEC14L5O43304 696 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 CD53P19397 219 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 IL12BP29460 328 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 PSMB10P40306 273 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 PRPS1P60891 318 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SHBQ15464 509 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 SLC25A35Q3KQZ1 300 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 LCN1P1Q5VSP4 162 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 PXKQ7Z7A4 578 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 LRRC75AQ8NAA5 344 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 OR14A16Q8NHC5 309 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 GPX7Q96SL4 187 aaPredicted RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 TMEM43Q9BTV4 400 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 MMP25Q9NPA2 562 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 RPRD1BQ9NQG5 326 aaKnown RBP15.46■□□□□ 0.07
PHGDH-229ENST00000641891 RASD1Q9Y272 281 aa15.46■□□□□ 0.07
PHGDH-229ENST00000641891 ADAMTS20P59510 1910 aa15.46■□□□□ 0.06
PHGDH-229ENST00000641891 FER1L5A0AVI2 2057 aa15.46■□□□□ 0.06
PHGDH-229ENST00000641891 A0A1B0GVC2 190 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 A6NIN4 97 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 IDSB3KWA1 339 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 HCRTR2O43614 444 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CFL1P23528 166 aaKnown RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 MYL9P24844 172 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 HTR3AP46098 478 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 TMED10P49755 219 aaKnown RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CDONQ4KMG0 1287 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 SFXN4Q6P4A7 337 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 FAM122BQ7Z309 247 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 TMPRSS9Q7Z410 1059 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 SYT9Q86SS6 491 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 GLCCI1Q86VQ1 547 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 RAB43Q86YS6 212 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 LSM14AQ8ND56 463 aaKnown RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CHAC2Q8WUX2 184 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 SNX33Q8WV41 574 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ZNF501Q96CX3 271 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 DEPDC7Q96QD5 511 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 MESP1Q9BRJ9 268 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 FGF21Q9NSA1 209 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 NCDNQ9UBB6 729 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 EXTL2Q9UBQ6 330 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 POU2F3Q9UKI9 436 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 HIF3AQ9Y2N7 669 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 COL5A1P20908 1838 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 A0A1B0GX78 115 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 PRR32B1ATL7 298 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 H7C1C5 153 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ATP6V1G1O75348 118 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms