RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DIO1P49895 249 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ISXQ2M1V0 245 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 IDNKQ5T6J7 187 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 CEACAM19Q7Z692 300 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 KMT5CQ86Y97 462 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 SOSTQ9BQB4 213 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 LAT2Q9GZY6 243 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 MMP25Q9NPA2 562 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 HIF3AQ9Y2N7 669 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 TEX13CA0A0J9YWL9 993 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 HTR3EA5X5Y0 456 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 IDH3BO43837 385 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 EVX1P49640 407 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ACTA2P62736 377 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ACTG2P63267 376 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ZNF117Q03924 483 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 SELENBP1Q13228 472 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 SHBQ15464 509 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 AKAP14Q86UN6 197 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ZBTB8BQ8NAP8 495 aaPredicted RBP19.62■□□□□ 0.73
CLN6-224ENST00000638076 OR6K6Q8NGW6 343 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 LIPHQ8WWY8 451 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 GHSRQ92847 366 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 CCDC74AQ96AQ1 378 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ELF4Q99607 663 aaPredicted RBP19.62■□□□□ 0.73
CLN6-224ENST00000638076 NMNAT2Q9BZQ4 307 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ZNF768Q9H5H4 540 aaKnown RBP19.62■□□□□ 0.73
CLN6-224ENST00000638076 COPS7AQ9UBW8 275 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 ST6GALNAC2Q9UJ37 374 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 PCDHGB7Q9Y5F8 929 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 HCRTR2O43614 444 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 SELENOFO60613 162 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 TACR3P29371 465 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 NRG3P56975 720 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 CBX3Q13185 183 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 P2RY14Q15391 338 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 LEG1Q6P5S2 330 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 OR1N1Q8NGS0 311 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 TP53INP1Q96A56 240 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 Q96M85 177 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 WWTR1Q9GZV5 400 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 PPP1R3EQ9H7J1 279 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 CTSFQ9UBX1 484 aa19.61■□□□□ 0.73
CLN6-224ENST00000638076 A0A1W2PRG6 482 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 C4orf47A7E2U8 309 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 C17orf51A8MQB3 221 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SOX1O00570 391 aaPredicted RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 SC5DO75845 299 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 ARRB1P49407 418 aaPredicted RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 LTBQ06643 244 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 PLCXD2Q0VAA5 305 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 ASAH1Q13510 395 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 IL18Q14116 193 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SLC35D3Q5M8T2 416 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 HBMQ6B0K9 141 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 MARCH3Q86UD3 253 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SNX33Q8WV41 574 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 PELI1Q96FA3 418 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 TSPAN2O60636 221 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 ASAH2BP0C7U1 165 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 CDKN2AP42771 156 aaKnown RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 ALG10Q5BKT4 473 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 METAP1DQ6UB28 335 aaPredicted RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 LYPD4Q6UWN0 246 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SHISA6Q6ZSJ9 500 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 LANCL3Q6ZV70 420 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SLC29A4Q7RTT9 530 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SYS1Q8N2H4 156 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 C7orf57Q8NEG2 295 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 OR13C5Q8NGS8 318 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 ACOT12Q8WYK0 555 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 KTI12Q96EK9 354 aaPredicted RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 CCDC86Q9H6F5 360 aaKnown RBP19.6■□□□□ 0.73
CLN6-224ENST00000638076 SIT1Q9Y3P8 196 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 NUP210LQ5VU65 1888 aa19.6■□□□□ 0.73
CLN6-224ENST00000638076 SEC14L5O43304 696 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 CD14P08571 375 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 MYL9P24844 172 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 CASP3P42574 277 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 FOXL2P58012 376 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 OR2B6P58173 313 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 CTXN1P60606 82 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 CDONQ4KMG0 1287 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 ACSM3Q53FZ2 586 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 YOD1Q5VVQ6 348 aaPredicted RBP19.59■□□□□ 0.73
CLN6-224ENST00000638076 FAM122BQ7Z309 247 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 PXKQ7Z7A4 578 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 Q8N402 240 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 MS4A15Q8N5U1 240 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 LRRC75AQ8NAA5 344 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 DEPDC7Q96QD5 511 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 ADAM19Q9H013 955 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 C11orf54Q9H0W9 315 aaPredicted RBP19.59■□□□□ 0.73
CLN6-224ENST00000638076 ADAM30Q9UKF2 790 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 COPS3Q9UNS2 423 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 RP1P56715 2156 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 CABIN1Q9Y6J0 2220 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 AGRPO00253 132 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 NDUFB5O43674 189 aa19.59■□□□□ 0.73
CLN6-224ENST00000638076 SLC2A2P11168 524 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms