RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 METTL2AQ96IZ6 378 aaKnown RBP15.54■□□□□ 0.08
CLN6-212ENST00000636020 NOX3Q9HBY0 568 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 OXSMQ9NWU1 459 aa15.54■□□□□ 0.08
CLN6-212ENST00000636020 FAF1Q9UNN5 650 aaPredicted RBP15.54■□□□□ 0.08
CLN6-212ENST00000636020 SEC22BO75396 215 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 KRT16P08779 473 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 NR4A1P22736 598 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 ALDH3B1P43353 468 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 ETF1P62495 437 aaKnown RBP15.53■□□□□ 0.08
CLN6-212ENST00000636020 BAMBIQ13145 260 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 GPR68Q15743 365 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 EIF3MQ7L2H7 374 aaKnown RBP15.53■□□□□ 0.08
CLN6-212ENST00000636020 FAM71CQ8NEG0 241 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 RAB39BQ96DA2 213 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 ALKBH3Q96Q83 286 aaPredicted RBP15.53■□□□□ 0.08
CLN6-212ENST00000636020 CCT7Q99832 543 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 SF3B5Q9BWJ5 86 aaKnown RBP15.53■□□□□ 0.08
CLN6-212ENST00000636020 PIF1Q9H611 641 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 MID1IP1Q9NPA3 183 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 MMP24Q9Y5R2 645 aa15.53■□□□□ 0.08
CLN6-212ENST00000636020 TMEM229AB2RXF0 380 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 BCAS1O75363 584 aaPredicted RBP15.52■□□□□ 0.08
CLN6-212ENST00000636020 UGT2B17O75795 530 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 RYKP34925 604 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 PGM1P36871 562 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 CCT3P49368 545 aaKnown RBP15.52■□□□□ 0.08
CLN6-212ENST00000636020 PRKAA2P54646 552 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 CAV1Q03135 178 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 MVKQ03426 396 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 TP53BP2Q13625 1128 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 OTUD3Q5T2D3 398 aaPredicted RBP15.52■□□□□ 0.08
CLN6-212ENST00000636020 TMEM99Q8N816 258 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 SLC25A28Q96A46 364 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 L3HYPDHQ96EM0 354 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 ZNF48Q96MX3 618 aaPredicted RBP15.52■□□□□ 0.08
CLN6-212ENST00000636020 TSSK3Q96PN8 268 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 OR7D2Q96RA2 312 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 GPA33Q99795 319 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 ACSS3Q9H6R3 686 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 CRLF2Q9HC73 371 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 ZNF69Q9UC07 566 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 PCDHGB4Q9UN71 923 aa15.52■□□□□ 0.08
CLN6-212ENST00000636020 TMED7-TICAM2A0A0A6YYA0 188 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 ZNF503-AS2A6NEH8 195 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 CLDN34H7C241 214 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 RAD51CO43502 376 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 FCMRO60667 390 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 IGHV2-5P01817 119 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 SDC1P18827 310 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 PRPH2P23942 346 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 ATP5F1P24539 256 aaPredicted RBP15.51■□□□□ 0.07
CLN6-212ENST00000636020 ARR3P36575 388 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 SELENOPP49908 381 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 GNG11P61952 73 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 NPRL3Q12980 569 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 MAD2L1BPQ15013 274 aaPredicted RBP15.51■□□□□ 0.07
CLN6-212ENST00000636020 AVPI1Q5T686 147 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 SAXO2Q658L1 398 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 EMBQ6PCB8 327 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 ZDHHC24Q6UX98 284 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 C1QL4Q86Z23 238 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 OR56A1Q8NGH5 318 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 CLHC1Q8NHS4 586 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 PMM1Q92871 262 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 TMIGD2Q96BF3 282 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 DDIT4LQ96D03 193 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 FCRL1Q96LA6 429 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 CCT8L2Q96SF2 557 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 SYT3Q9BQG1 590 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 SERHL2Q9H4I8 314 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 GSTO2Q9H4Y5 243 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 ZNF385DQ9H6B1 395 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 TMEM216Q9P0N5 145 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 BAIAP2L1Q9UHR4 511 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 TMED7Q9Y3B3 224 aa15.51■□□□□ 0.07
CLN6-212ENST00000636020 ZNF208O43345 1280 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 UPK3AO75631 287 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 INHBAP08476 426 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 PAFAH1B1P43034 410 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 SH3BGRP55822 239 aaPredicted RBP15.5■□□□□ 0.07
CLN6-212ENST00000636020 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 SYT10Q6XYQ8 523 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 RHOUQ7L0Q8 258 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 LRP11Q86VZ4 500 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 BCL6BQ8N143 479 aaPredicted RBP15.5■□□□□ 0.07
CLN6-212ENST00000636020 OR5D16Q8NGK9 328 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 PSMA8Q8TAA3 256 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 WFDC12Q8WWY7 111 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 MTERF3Q96E29 417 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 C1orf109Q9NX04 203 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 MYEF2Q9P2K5 600 aaKnown RBP15.5■□□□□ 0.07
CLN6-212ENST00000636020 NUP50Q9UKX7 468 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 MKLN1Q9UL63 735 aa15.5■□□□□ 0.07
CLN6-212ENST00000636020 TMEM72A0PK05 275 aa15.49■□□□□ 0.07
CLN6-212ENST00000636020 ZC3H12DA2A288 527 aaKnown RBP15.49■□□□□ 0.07
CLN6-212ENST00000636020 M0QZ24 198 aa15.49■□□□□ 0.07
CLN6-212ENST00000636020 STX11O75558 287 aa15.49■□□□□ 0.07
CLN6-212ENST00000636020 AKR7A3O95154 331 aa15.49■□□□□ 0.07
CLN6-212ENST00000636020 BCKDHAP12694 445 aa15.49■□□□□ 0.07
CLN6-212ENST00000636020 SERPINB9P50453 376 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms