RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LMF2	Q9BU23	707 aa	Known RBP	13.23	□□□□□ -0.29
NEDD4L-238	ENST00000635997	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.23	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SYNPO2L	Q9H987	977 aa		13.23	□□□□□ -0.29
NEDD4L-238	ENST00000635997	HHATL	Q9HCP6	504 aa		13.23	□□□□□ -0.29
NEDD4L-238	ENST00000635997	UGT2A1	Q9Y4X1	527 aa		13.23	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ATAD5	Q96QE3	1844 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997		H0YJX3	145 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SYT7	O43581	403 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SCGB1D2	O95969	90 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	RFC3	P40938	356 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CSNK1A1	P48729	337 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	LRRC37A5P	Q49AS3	106 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	LRIF1	Q5T3J3	769 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC25A25	Q6KCM7	469 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	GFRAL	Q6UXV0	394 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	NKAIN4	Q8IVV8	208 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997		Q8N402	240 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PAPD5	Q8NDF8	572 aa	Known RBP	13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	FAM46B	Q96A09	425 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	NMNAT3	Q96T66	252 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CSF3R	Q99062	836 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MMP27	Q9H306	513 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF69	Q9UC07	566 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF225	Q9UK10	706 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SCN10A	Q9Y5Y9	1956 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	GTF2F2	P13984	249 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MAK	P20794	623 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CYB561	P49447	251 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MAN2A2	P49641	1150 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	TMPRSS3	P57727	454 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ACTA2	P62736	377 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ACTG2	P63267	376 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	RUNX2	Q13950	521 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CRMP1	Q14194	572 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	IHH	Q14623	411 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MELK	Q14680	651 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SPCS2	Q15005	226 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	LRRC18	Q8N456	261 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF511	Q8NB15	262 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PRR7	Q8TB68	274 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	AMBRA1	Q9C0C7	1298 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ABCG5	Q9H222	651 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CDCP1	Q9H5V8	836 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF160	Q9HCG1	818 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PRDM9	Q9NQV7	894 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MCTS1	Q9ULC4	181 aa	Known RBP	13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC17A4	Q9Y2C5	497 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLITRK5	O94991	958 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CD1E	P15812	388 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	FRK	P42685	505 aa	Predicted RBP	13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CAPZB	P47756	277 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SIRPA	P78324	504 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	EMX1	Q04741	257 aa	Predicted RBP	13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF547	Q8IVP9	402 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	MS4A15	Q8N5U1	240 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	OR5AK2	Q8NH90	309 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC7A13	Q8TCU3	470 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SGCD	Q92629	289 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	KLHL15	Q96M94	604 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC6A7	Q99884	636 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PCDHGB2	Q9Y5G2	931 aa		13.22	□□□□□ -0.29
NEDD4L-238	ENST00000635997		A0A1W2PQF6	199 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	GATB	O75879	557 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	OR8G3P	P0DMU2	310 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	OCLN	Q16625	522 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	GARNL3	Q5VVW2	1013 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	GRAMD2A	Q8IUY3	354 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC35F2	Q8IXU6	374 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	OR1J4	Q8NGS1	313 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	BORCS8	Q96FH0	119 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ZNF845	Q96IR2	970 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	C4orf36	Q96KX1	117 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	SLC46A1	Q96NT5	459 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ULBP2	Q9BZM5	246 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	TDRD6	O60522	2096 aa	Known RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	TMEM72	A0PK05	275 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	RBBP9	O75884	186 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	ERCC1	P07992	297 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	RAB3B	P20337	219 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PPP5C	P53041	499 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	PPP1CA	P62136	330 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	FBXO42	Q6P3S6	717 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CNRIP1	Q96F85	164 aa	Predicted RBP	13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	CLCC1	Q96S66	551 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	INTS14	Q96SY0	518 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	BAIAP2	Q9UQB8	552 aa		13.21	□□□□□ -0.29
NEDD4L-238	ENST00000635997	FAM166B	A8MTA8	275 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SUSD5	O60279	629 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IDUA	P35475	653 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SSR4	P51571	173 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HSD17B7	P56937	341 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OTP	Q5XKR4	325 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LIX1L	Q8IVB5	337 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NDNF	Q8TB73	568 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC35A4	Q96G79	324 aa		13.21	□□□□□ -0.3

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