RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR7A5Q15622 319 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 PAQR6Q6TCH4 344 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 UGT2A3Q6UWM9 527 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 CDK20Q8IZL9 346 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 TMEM99Q8N816 258 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 OR4A15Q8NGL6 344 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 CNOT9Q92600 299 aaKnown RBP12.72□□□□□ -0.37
PNKP-218ENST00000625299 ROPN1LQ96C74 230 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 EXOSC3Q9NQT5 275 aaKnown RBP12.72□□□□□ -0.37
PNKP-218ENST00000625299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.72□□□□□ -0.37
PNKP-218ENST00000625299 OSGIN1Q9UJX0 560 aa12.72□□□□□ -0.37
PNKP-218ENST00000625299 FBXO9Q9UK97 447 aaPredicted RBP12.72□□□□□ -0.37
PNKP-218ENST00000625299 OR6C65A6NJZ3 312 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 SMIM23A6NLE4 172 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 VSTM5A8MXK1 200 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 ZNF208O43345 1280 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 ADRA2AP08913 450 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.37
PNKP-218ENST00000625299 SELENOPP49908 381 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 PLAURQ03405 335 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 HGFACQ04756 655 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 SCGB2A2Q13296 93 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 RIN1Q13671 783 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 CEACAM7Q14002 265 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 WHAMMP3Q1A5X7 153 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 GPAT3Q53EU6 434 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 XKR7Q5GH72 579 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 OR4F3Q6IEY1 312 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 FRRS1Q6ZNA5 592 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 MYPOPQ86VE0 399 aaPredicted RBP12.71□□□□□ -0.37
PNKP-218ENST00000625299 NUP37Q8NFH4 326 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 CKAP2Q8WWK9 683 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 BCL2L2Q92843 193 aaPredicted RBP12.71□□□□□ -0.37
PNKP-218ENST00000625299 PMM1Q92871 262 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 DOK1Q99704 481 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 ZNF442Q9H7R0 627 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 HIF1ANQ9NWT6 349 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 MID2Q9UJV3 735 aa12.71□□□□□ -0.37
PNKP-218ENST00000625299 ARPC4-TTLL3A0A0A6YYG9 625 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 TMEM89A2RUT3 159 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 FAM157AC9JC47 383 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 TRIM13O60858 407 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 AGR2O95994 175 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 GPIP06744 558 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 FUT5Q11128 374 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 NPRL3Q12980 569 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 UGT3A2Q3SY77 523 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 C6orf136Q5SQH8 315 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 NIPAL3Q6P499 406 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 PEG10Q86TG7 708 aaKnown RBP12.7□□□□□ -0.38
PNKP-218ENST00000625299 RIMKLAQ8IXN7 391 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 C4orf33Q8N1A6 199 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
PNKP-218ENST00000625299 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 SF3B5Q9BWJ5 86 aaKnown RBP12.7□□□□□ -0.38
PNKP-218ENST00000625299 POLE3Q9NRF9 147 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 ADPRHL2Q9NX46 363 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 CRNNQ9UBG3 495 aaPredicted RBP12.7□□□□□ -0.38
PNKP-218ENST00000625299 PCDHB10Q9UN67 800 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 GRIP1Q9Y3R0 1128 aa12.7□□□□□ -0.38
PNKP-218ENST00000625299 LIPT2A6NK58 231 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 TRIM77I1YAP6 450 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 UPK3AO75631 287 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 CPSF4O95639 269 aaKnown RBP12.69□□□□□ -0.38
PNKP-218ENST00000625299 IGLV1-44P01699 117 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 FGF4P08620 206 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 G6PDP11413 515 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 KRT4P19013 534 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 SNTB2Q13425 540 aaKnown RBP12.69□□□□□ -0.38
PNKP-218ENST00000625299 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 LINGO2Q7L985 606 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 ANKRD46Q86W74 232 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 FAM216AQ8WUB2 273 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 OIT3Q8WWZ8 545 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 TUBGCP3Q96CW5 907 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 TAPBPLQ9BX59 468 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 SPEF1Q9Y4P9 236 aa12.69□□□□□ -0.38
PNKP-218ENST00000625299 TMEM129A0AVI4 362 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 MSMBP08118 114 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 IGFBP1P08833 259 aaPredicted RBP12.68□□□□□ -0.38
PNKP-218ENST00000625299 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 SAGP10523 405 aaPredicted RBP12.68□□□□□ -0.38
PNKP-218ENST00000625299 UQCRBP14927 111 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 TCN1P20061 433 aaPredicted RBP12.68□□□□□ -0.38
PNKP-218ENST00000625299 PAX7P23759 505 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 CXCR1P25024 350 aa12.68□□□□□ -0.38
PNKP-218ENST00000625299 GPR6P46095 362 aaPredicted RBP12.68□□□□□ -0.38
PNKP-218ENST00000625299 CAPZA2P47755 286 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms