RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 RBM24Q9BX46 236 aaKnown RBP11.35□□□□□ -0.59
PNKP-217ENST00000625216 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 VCX3BQ9H321 246 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 REEP1Q9H902 201 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 MAN2C1Q9NTJ4 1040 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 ACER3Q9NUN7 267 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 PAQR5Q9NXK6 330 aaPredicted RBP11.35□□□□□ -0.59
PNKP-217ENST00000625216 EDARQ9UNE0 448 aa11.35□□□□□ -0.59
PNKP-217ENST00000625216 FAM32AQ9Y421 112 aaKnown RBP11.35□□□□□ -0.59
PNKP-217ENST00000625216 TRBV4-1A0A0J9YWV2 114 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 C7orf72A4D263 438 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 CPSF4LA6NMK7 179 aaKnown RBP11.34□□□□□ -0.59
PNKP-217ENST00000625216 A8MXE2 369 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 H3BNH8 94 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 TNFRSF11BO00300 401 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 AP3D1O14617 1153 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 MSTNO14793 375 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 GADD45GO95257 159 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 TGM6O95932 706 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 CSTAP01040 98 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 THY1P04216 161 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
PNKP-217ENST00000625216 CLDN15P56746 228 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 DAG1Q14118 895 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 ENTPD8Q5MY95 495 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 OTUD3Q5T2D3 398 aaPredicted RBP11.34□□□□□ -0.59
PNKP-217ENST00000625216 ZBTB49Q6ZSB9 765 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 PLEKHM3Q6ZWE6 761 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 STK32CQ86UX6 486 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 HIPK1Q86Z02 1210 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 UBQLNLQ8IYU4 475 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 OFCC1Q8IZS5 231 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 GTPBP8Q8N3Z3 284 aaPredicted RBP11.34□□□□□ -0.59
PNKP-217ENST00000625216 PACRGLQ8N7B6 248 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 OR52J3Q8NH60 311 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 FUZQ9BT04 418 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 RASSF1Q9NS23 344 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 TESQ9UGI8 421 aaKnown RBP11.34□□□□□ -0.59
PNKP-217ENST00000625216 ITGB1BP2Q9UKP3 347 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 SLC35A3Q9Y2D2 325 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 SPG11Q96JI7 2443 aa11.34□□□□□ -0.59
PNKP-217ENST00000625216 MED12Q93074 2177 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 A0A1W2PNV4 684 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 A6NNC1 897 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 G3V2T6 193 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 H3BML4 177 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 DLGAP1O14490 977 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 TNFSF13O75888 250 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 LYPD3O95274 346 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 NTN1O95631 604 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 H1F0P07305 194 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 UBL4AP11441 157 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 PRKACGP22612 351 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 EIF1P41567 113 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 ACAA2P42765 397 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 ZNF41P51814 821 aaPredicted RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 SUCLG1P53597 346 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 CLDN20P56880 219 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 RAC1P63000 192 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 PPP2R2BQ00005 443 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 SKP2Q13309 424 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 ZSWIM7Q19AV6 140 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 RANBP3LQ86VV4 465 aaPredicted RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 ZDHHC13Q8IUH4 622 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 GCNT2Q8N0V5 402 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 PHOSPHO1Q8TCT1 267 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 NRBF2Q96F24 287 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 DACH2Q96NX9 599 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 POLDIP3Q9BY77 421 aaKnown RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 ARMC7Q9H6L4 198 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 EVA1AQ9H8M9 152 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 NMNAT1Q9HAN9 279 aaPredicted RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 MED17Q9NVC6 651 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 USE1Q9NZ43 259 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 PDP1Q9P0J1 537 aaPredicted RBP11.33□□□□□ -0.6
PNKP-217ENST00000625216 VDAC3Q9Y277 283 aa11.33□□□□□ -0.6
PNKP-217ENST00000625216 ARHGAP21Q5T5U3 1957 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 AKAP9Q99996 3911 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 SEC14L5O43304 696 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 FMO6PO60774 539 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 CYP7B1O75881 506 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 OR5F1O95221 314 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 HPRP00739 348 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 ALPLP05186 524 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 FCGR2AP12318 317 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 ADH6P28332 368 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 ALDH3A2P51648 485 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 HMGA2P52926 109 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 SUMO3P55854 103 aaPredicted RBP11.32□□□□□ -0.6
PNKP-217ENST00000625216 TAS2R41P59536 307 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 ZNF117Q03924 483 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 EPS8Q12929 822 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
PNKP-217ENST00000625216 SEC23BQ15437 767 aa11.32□□□□□ -0.6
PNKP-217ENST00000625216 TESK1Q15569 626 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms