RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CLEC12AQ5QGZ9 265 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 RBM48Q5RL73 367 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ACSM5Q6NUN0 579 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 PTCHD4Q6ZW05 846 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HIST3H2AQ7L7L0 130 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SATL1Q86VE3 508 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ZNF786Q8N393 782 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 LNX2Q8N448 690 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 LRRC17Q8N6Y2 441 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HIST1H2ACQ93077 130 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ZNF566Q969W8 418 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SCMH1Q96GD3 660 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 MOGAT1Q96PD6 335 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ZNF696Q9H7X3 374 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CORINQ9Y5Q5 1042 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CNTRLQ7Z7A1 2325 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 BHLHE40O14503 412 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 EFNA2O43921 213 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 CCDC159P0C7I6 412 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 GABRB1P18505 474 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 PCYT1AP49585 367 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 TNFSF10P50591 281 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 EFNB1P98172 346 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 PGGHGQ32M88 737 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 SLC25A30Q5SVS4 291 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 BORAQ6PGQ7 559 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 IQCF1Q8N6M8 205 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 CNIH3Q8TBE1 160 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 TM9SF4Q92544 642 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 PPP1R14BQ96C90 147 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 GPX7Q96SL4 187 aaPredicted RBP12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 ADNPQ9H2P0 1102 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 RASSF1Q9NS23 344 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 ZNF226Q9NYT6 803 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 BLOC1S6Q9UL45 172 aa12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
CLTCL1-212ENST00000622493 AKAP13Q12802 2813 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 LINC01387J3KSC0 135 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 SMIM18P0DKX4 95 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 GRK5P34947 590 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 SNAPC1Q16533 368 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 ZNF766Q5HY98 468 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 C1QL3Q5VWW1 255 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 DPY19L2P2Q6ZN68 376 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 GALNTL5Q7Z4T8 443 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 NANOGNBQ7Z5D8 188 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 FAM26EQ8N5C1 309 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 ZFP62Q8NB50 900 aaPredicted RBP12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 OR4Q3Q8NH05 313 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 UBE2FQ969M7 185 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 Q96MT0 163 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 IFT27Q9BW83 186 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 OR2B2Q9GZK3 357 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 OR11A1Q9GZK7 315 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 KLHL1Q9NR64 748 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 IL20RAQ9UHF4 553 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
CLTCL1-212ENST00000622493 OR2M5A3KFT3 312 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 GJE1A6NN92 205 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 SHISA8B8ZZ34 492 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 FTCDNL1E5RQL4 147 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 BLOC1S5-TXNDC5H3BN57 136 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 FZD7O75084 574 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 WBP4O75554 376 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 TFAP2AP05549 437 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 RFPL3SP0C7P2 107 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 TFPIP10646 304 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 PEPDP12955 493 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 IL11P20809 199 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 GDF1P27539 372 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 UQCRC1P31930 480 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 IDUAP35475 653 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 UCNP55089 124 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 RAC1P63000 192 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 TOMM20Q15388 145 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 SGCBQ16585 318 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 MEDAGQ5VYS4 303 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 LAIR2Q6ISS4 152 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 IGFL3Q6UXB1 125 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 SCAIQ8N9R8 606 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 OR5J2Q8NH18 312 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 OR14L1PQ8NHC6 308 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 APH1BQ8WW43 257 aa12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 NMD3Q96D46 503 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-212ENST00000622493 PLEKHA8Q96JA3 519 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms