RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 RANBP3LQ86VV4 465 aaPredicted RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 RBM45Q8IUH3 476 aaKnown RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 CCDC103Q8IW40 242 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 FITM2Q8N6M3 262 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 ZIC4Q8N9L1 334 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 PIGXQ8TBF5 258 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 TMEM45BQ96B21 275 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 ZHX1-C8orf76Q96EF9 292 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 KTI12Q96EK9 354 aaPredicted RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 SLC47A1Q96FL8 570 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 SLC41A3Q96GZ6 507 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 BOD1Q96IK1 185 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 LRRC37BQ96QE4 947 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 ZNF300Q96RE9 604 aaPredicted RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 TMEM43Q9BTV4 400 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 POLR2J2Q9GZM3 115 aaKnown RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 FAM107BQ9H098 131 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 POLR2J3Q9H1A7 115 aaKnown RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 FANCFQ9NPI8 374 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 ADAM21Q9UKJ8 722 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 TUBAL3A6NHL2 446 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 A6NNC1 897 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 C16orf97H3BN30 126 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 PDLIM1O00151 329 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 GPR171O14626 319 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 CHP2O43745 196 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 OR2T1O43869 369 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 DCTN3O75935 186 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
NEK3-209ENST00000618856 VAMP5O95183 116 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 IGF2P01344 180 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 IFNA14P01570 189 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 THBDP07204 575 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 POU2F1P14859 743 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 PPP3CBP16298 524 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 COX5AP20674 150 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 LOXP28300 417 aaPredicted RBP7.31□□□□□ -1.24
NEK3-209ENST00000618856 NUDT2P50583 147 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 OR2B6P58173 313 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TLE4Q04727 773 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 LTBQ06643 244 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 SNTB1Q13884 538 aaKnown RBP7.31□□□□□ -1.24
NEK3-209ENST00000618856 P2RY6Q15077 328 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 CYBRD1Q53TN4 286 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 ENTPD8Q5MY95 495 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 SEZ6L2Q6UXD5 910 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 WDR88Q6ZMY6 472 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 Q6ZT83 130 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 GALNT5Q7Z7M9 940 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TMEM99Q8N816 258 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 ADPRHL1Q8NDY3 354 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 LINC01560Q8TB33 94 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TAAR8Q969N4 342 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 LURAP1Q96LR2 239 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 WFIKKN1Q96NZ8 548 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 MCHR1Q99705 422 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 PRSS27Q9BQR3 290 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 NAA11Q9BSU3 229 aaPredicted RBP7.31□□□□□ -1.24
NEK3-209ENST00000618856 HDHD5Q9BXW7 423 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 SLC19A3Q9BZV2 496 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 ALG2Q9H553 416 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TMEM27Q9HBJ8 222 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 SPAG4Q9NPE6 437 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 RASSF1Q9NS23 344 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 ARL8BQ9NVJ2 186 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 EMC3Q9P0I2 261 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 B3GAT1Q9P2W7 334 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 MALT1Q9UDY8 824 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 CD300AQ9UGN4 299 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TAGLN3Q9UI15 199 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 BAG5Q9UL15 447 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 GPR52Q9Y2T5 361 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 FLVCR1Q9Y5Y0 555 aa7.31□□□□□ -1.24
NEK3-209ENST00000618856 TRAV36DV7A0A075B6V5 113 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SH3D21A4FU49 640 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 TRAPPC13A5PLN9 417 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 ELOA3DA6NLF2 546 aaPredicted RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 CXCR6O00574 342 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SIAH2O43255 324 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 AKR7A3O95154 331 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 BGLAPP02818 100 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 HRGP04196 525 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 TSPAN19P0C672 248 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 THRBP10828 461 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 HSD17B1P14061 328 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 GGT1P19440 569 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 CRYGSP22914 178 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 CPOXP36551 454 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 CPA2P48052 419 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 OR7A5Q15622 319 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 ELOA3BQ3SY89 546 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SPATS1Q496A3 300 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 OTUD3Q5T2D3 398 aaPredicted RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 SFRP5Q5T4F7 317 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 FAM69AQ5T7M9 428 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 GKAP1Q5VSY0 366 aaPredicted RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 PPP4R4Q6NUP7 873 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 CREB3L2Q70SY1 520 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms