RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 TRABD2BA6NFA1 517 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ARGFXA6NJG6 315 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 BHLHE40O14503 412 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ZNF28P17035 718 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ZMAT1Q5H9K5 638 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 LIX1LQ8IVB5 337 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 CBARPQ8N350 705 aaPredicted RBP8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 FRMD1Q8N878 549 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC25A46Q96AG3 418 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ARL5BQ96KC2 179 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 TMEM100Q9NV29 134 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 HCFC1R1Q9NWW0 138 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 MED16Q9Y2X0 877 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ADAM18Q9Y3Q7 739 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PRAMEF27A3QJZ7 478 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 AIFM1O95831 613 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 OR13C7P0DN81 318 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 NOVP48745 357 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 RNF4P78317 190 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SIRPAP78324 504 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 DUSP7Q16829 419 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PKDCCQ504Y2 493 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PRAMEF9Q5VWM5 478 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SPTSSAQ969W0 71 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 ARNT2Q9HBZ2 717 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PEX12O00623 359 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 C1QBP02746 253 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PVRP15151 417 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 OPRD1P41143 372 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 DAP3P51398 398 aaKnown RBP8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 HCCSP53701 268 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 RPL23AP62750 156 aaKnown RBP8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 PDE7AQ13946 482 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.67□□□□□ -1.028e-9■■■■■ 27.3
SH3GLB1-205ENST00000616170 LRRC18Q8N456 261 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 NMNAT3Q96T66 252 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SPIN2AQ99865 258 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 SPIN2BQ9BPZ2 258 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 HOXD1Q9GZZ0 328 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 HHLA2Q9UM44 414 aa8.67□□□□□ -1.02
SH3GLB1-205ENST00000616170 CCDC85CA6NKD9 419 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ZNF593O00488 134 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 HOXC11O43248 304 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 UBL3O95164 117 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 TRIM23P36406 574 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SFRP5Q5T4F7 317 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 DLEU7Q6UYE1 221 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ADGRF3Q8IZF5 1079 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ANKLE1Q8NAG6 615 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 HSD17B8Q92506 261 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 RHNO1Q9BSD3 238 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 KATNB1Q9BVA0 655 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 CD53P19397 219 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 NUDT1P36639 197 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 UBE2MP61081 183 aaKnown RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 FAAP20Q6NZ36 180 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 PAQR9Q6ZVX9 377 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 FAM57BQ71RH2 274 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 TMEM200AQ86VY9 491 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 AVL9Q8NBF6 648 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SCARB1Q8WTV0 552 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ADOQ96SZ5 270 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 NICN1Q9BSH3 213 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 PAPOLGQ9BWT3 736 aaKnown RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 EFCAB7A8K855 629 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SELENOFO60613 162 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ZNF623O75123 536 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 GPX5O75715 221 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 FURINP09958 794 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 CCL5P13501 91 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 TIMP2P16035 220 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ZNF852Q6ZMS4 543 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 ESPNLQ6ZVH7 1005 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 OR5D18Q8NGL1 313 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC41A2Q96JW4 573 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SFXN2Q96NB2 322 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 MCOLN1Q9GZU1 580 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC2A4RGQ9NR83 387 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 LHX3Q9UBR4 397 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC6A14Q9UN76 642 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 CLINT1Q14677 625 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 YOD1Q5VVQ6 348 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 LRRC56Q8IYG6 542 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 PTTG3PQ9NZH4 202 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 A8MXE2 369 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 HRO43593 1189 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 NSA2O95478 260 aaKnown RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 LALBAP00709 142 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 HOXB9P17482 250 aaPredicted RBP8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 SLC14A2Q15849 920 aa8.66□□□□□ -1.02
SH3GLB1-205ENST00000616170 CLVS2Q5SYC1 327 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms