RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ANKRD12Q6UB98 2062 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 IGHV5-51A0A0C4DH38 117 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 FAM183AA6NL82 134 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CD14P08571 375 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PITPNBP48739 271 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 DUSP8Q13202 625 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 SLC10A1Q14973 349 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 SPRED1Q7Z699 444 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF454Q8N9F8 522 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TTC9Q92623 222 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 BCL7BQ9BQE9 202 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 FUZQ9BT04 418 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 METTL8Q9H825 291 aaKnown RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 RAB9BQ9NP90 201 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 DYNLRB1Q9NP97 96 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PAQR5Q9NXK6 330 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 COQ3Q9NZJ6 369 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 KLHL9Q9P2J3 617 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CD300AQ9UGN4 299 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PCDHGA6Q9Y5G7 932 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 MAGED1Q9Y5V3 778 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PLXNA1Q9UIW2 1896 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 C2orf72A6NCS6 295 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF891A8MT65 544 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 VAMP1P23763 118 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 EVI2BP34910 448 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 HTR5AP47898 357 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ILKQ13418 452 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 C9orf135Q5VTT2 229 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF691Q5VV52 312 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 OR1L3Q8NH93 324 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ST8SIA1Q92185 356 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 RFT1Q96AA3 541 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 WACQ9BTA9 647 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 C1orf198Q9H425 327 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 NOP16Q9Y3C1 178 aaKnown RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TRIP11Q15643 1979 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM269A0A1B0GVZ9 245 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 EEF1E1-BLOC1S5C9J1V9 151 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 UPK1AO00322 258 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 KLK10O43240 276 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 EEF1E1O43324 174 aaKnown RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 AVPR2P30518 371 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 STARD6P59095 220 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 SELENBP1Q13228 472 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CMPK2Q5EBM0 449 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PYHIN1Q6K0P9 492 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 IQCF2Q8IXL9 164 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 OR9K2Q8NGE7 335 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 OR2I1PQ8NGU4 316 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TMEM255BQ8WV15 326 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 UTP4Q969X6 686 aaKnown RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CSF3RQ99062 836 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 MRI1Q9BV20 369 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 AMBRA1Q9C0C7 1298 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 BCL2L10Q9HD36 194 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 KCNE1BA0A087WTH5 132 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 OR14I1A6ND48 311 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TEX46H3BTG2 121 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CDK1P06493 297 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PVALBP20472 110 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 GPR85P60893 370 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 RNF4P78317 190 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 HES3Q5TGS1 186 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF585AQ6P3V2 769 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 TBPL2Q6SJ96 375 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 LINC01555Q8NAE3 123 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 OR5D14Q8NGL3 314 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 WDR34Q96EX3 536 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF419Q96HQ0 510 aaPredicted RBP8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 CHIAQ9BZP6 476 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 PRDM7Q9NQW5 492 aa8.7□□□□□ -1.02
CLTCL1-208ENST00000615606 MICAL3Q7RTP6 2002 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 M0R129 80 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 OR2J2O76002 312 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 DIRAS3O95661 229 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 ALPLP05186 524 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 CELA2BP08218 269 aaPredicted RBP8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 FOLR1P15328 257 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF16P17020 682 aaPredicted RBP8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 SNU13P55769 128 aaKnown RBP8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 PMS2CLQ68D20 193 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 OLIG3Q7RTU3 272 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 STX12Q86Y82 276 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 LRRC56Q8IYG6 542 aaPredicted RBP8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 LOXL4Q96JB6 756 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 SEMA4CQ9C0C4 833 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 DNTTIP1Q9H147 329 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 NDUFAF4Q9P032 175 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 SH2B3Q9UQQ2 575 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 ADAM18Q9Y3Q7 739 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 METTL15A6NJ78 407 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF814B7Z6K7 855 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 HTR3BO95264 441 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 WNT11O96014 354 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 S100A6P06703 90 aa8.69□□□□□ -1.02
CLTCL1-208ENST00000615606 MSL3P1P0C860 447 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms