RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CHST8Q9H2A9 424 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 GLIPR2Q9H4G4 154 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 IL20RAQ9UHF4 553 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF221Q9UK13 617 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 PPT2Q9UMR5 302 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 UBE2J1Q9Y385 318 aaPredicted RBP9□□□□□ -0.97
TNFRSF9-204ENST00000615230 NME7Q9Y5B8 376 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 GALNSP34059 522 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 SRP9P49458 86 aaKnown RBP9□□□□□ -0.97
TNFRSF9-204ENST00000615230 RELAQ04206 551 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 OTUD1Q5VV17 481 aaPredicted RBP9□□□□□ -0.97
TNFRSF9-204ENST00000615230 HACD4Q5VWC8 232 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 SAXO2Q658L1 398 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 RFLNAQ6ZTI6 216 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 MARCH3Q86UD3 253 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 CNOT2Q9NZN8 540 aaKnown RBP9□□□□□ -0.97
TNFRSF9-204ENST00000615230 MED16Q9Y2X0 877 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 NPIPA5A0A0B4J1W7 369 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 CDHR4A6H8M9 788 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 TMEM212A6NML5 194 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 NPIPA7E9PJI5 369 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 NPIPA8P0DM63 369 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 RAB3BP20337 219 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 CNR1P21554 472 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 DRD5P21918 477 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 C18orf63Q68DL7 685 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR2V1Q8NHB1 315 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 OLIG1Q8TAK6 271 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 MED18Q9BUE0 208 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 ALG8Q9BVK2 526 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 DDA1Q9BW61 102 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 ESRP2Q9H6T0 727 aaKnown RBP9□□□□□ -0.97
TNFRSF9-204ENST00000615230 MARCH7Q9H992 704 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF69Q9UC07 566 aa9□□□□□ -0.97
TNFRSF9-204ENST00000615230 TRGV5A0A0B4J1U4 118 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 A0A0U1RQS6 177 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CRYAAP02489 173 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CHRNB1P11230 501 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 NID1P14543 1247 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GABRA2P47869 451 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR8B8Q15620 311 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF836Q6ZNA1 936 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 RFT1Q96AA3 541 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF419Q96HQ0 510 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CSF3RQ99062 836 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GAL3ST1Q99999 423 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 C1QTNF3Q9BXJ4 246 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF768Q9H5H4 540 aaKnown RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PRMT8Q9NR22 394 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 AHCYL1O43865 530 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GPRIN2O60269 458 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CRTAPO75718 401 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 SCGB1D2O95969 90 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 IFNA1P01562 189 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 FGL1Q08830 312 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CDHR3Q6ZTQ4 885 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 SLC35D2Q76EJ3 337 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 SPACA9Q96E40 222 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 SLC35A4Q96G79 324 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 TECTBQ96PL2 329 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PTTG2Q9NZH5 202 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PCDHGA7Q9Y5G6 932 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PCDHGA1Q9Y5H4 931 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ABHD16AO95870 558 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 EIF4EP06730 217 aaKnown RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF45Q02386 682 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CATR1Q13166 79 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 COL28A1Q2UY09 1125 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 THEM4Q5T1C6 240 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PXKQ7Z7A4 578 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GALNT10Q86SR1 603 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 KLBQ86Z14 1044 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 KLHDC8BQ8IXV7 354 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 CMTM4Q8IZR5 234 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 FAM83FQ8NEG4 500 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PSMF1Q92530 271 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 FAM71F1Q96KD3 344 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 NXF5Q9H1B4 397 aaKnown RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 MMP27Q9H306 513 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZNF395Q9H8N7 513 aaPredicted RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 WDR76Q9H967 626 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR2AT4A6NND4 320 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 UBBP0CG47 229 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PSKH1P11801 424 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GTF2F2P13984 249 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 PRPH2P23942 346 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 BIDP55957 195 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 RNF4P78317 190 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 GPR50Q13585 617 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR7E24Q6IFN5 339 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 RPL22L1Q6P5R6 122 aaKnown RBP8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 FAM111BQ6SJ93 734 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 NPSR1Q6W5P4 371 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 TPRA1Q86W33 373 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 ZFAND1Q8TCF1 268 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 SLAMF9Q96A28 289 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 FBXL20Q96IG2 436 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 QPCTLQ9NXS2 382 aa8.99□□□□□ -0.97
TNFRSF9-204ENST00000615230 BMP2P12643 396 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms