RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 MGARPQ8TDB4 240 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 ZG16BQ96DA0 208 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 ZHX1-C8orf76Q96EF9 292 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 MAELQ96JY0 434 aaKnown RBP12.02□□□□□ -0.49
LINC00116-203ENST00000611969 RMND5AQ9H871 391 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 THUMPD1Q9NXG2 353 aaKnown RBP12.02□□□□□ -0.49
LINC00116-203ENST00000611969 CALML5Q9NZT1 146 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 ZIM2Q9NZV7 527 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 EMC3Q9P0I2 261 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 HDGFL3Q9Y3E1 203 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 FKBP7Q9Y680 259 aa12.02□□□□□ -0.49
LINC00116-203ENST00000611969 AGAP5A6NIR3 686 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 ATP6V1G2-DDX39BF2Z307 99 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 GPR171O14626 319 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 UBDO15205 165 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 RGS9O75916 674 aaPredicted RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 TGDSO95455 350 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 H6PDO95479 791 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 NR2F1P10589 423 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 IL7RP16871 459 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 IL12AP29459 219 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 DIO1P49895 249 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 SLC25A3Q00325 362 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 CHRNB3Q05901 458 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 SYT14P1Q58G82 188 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 AGBL2Q5U5Z8 902 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 KLHL17Q6TDP4 642 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 GALNT5Q7Z7M9 940 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 CCDC106Q9BWC9 280 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 QRSL1Q9H0R6 528 aaKnown RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 SDR39U1Q9NRG7 319 aaPredicted RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 CHRNA9Q9UGM1 479 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 TMEFF2Q9UIK5 374 aaPredicted RBP12.01□□□□□ -0.49
LINC00116-203ENST00000611969 TRAPPC4Q9Y296 219 aa12.01□□□□□ -0.49
LINC00116-203ENST00000611969 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 TMEM247A6NEH6 219 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 FAAHO00519 579 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 EIF1BO60739 113 aaKnown RBP12□□□□□ -0.49
LINC00116-203ENST00000611969 ANP32DO95626 131 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 DBIP07108 87 aaKnown RBP12□□□□□ -0.49
LINC00116-203ENST00000611969 TFPIP10646 304 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 RYKP34925 604 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 PEX5LQ8IYB4 626 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 ZBTB9Q96C00 473 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 ITCHQ96J02 903 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 SLC38A1Q9H2H9 487 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 ZNF232Q9UNY5 417 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 PMF1-BGLAPU3KQ54 211 aa12□□□□□ -0.49
LINC00116-203ENST00000611969 IGKV3D-15A0A087WSY6 115 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CENPVL1A0A0U1RR11 272 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CIB4A0PJX0 185 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 PRAMEF27A3QJZ7 478 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CFAP73A6NFT4 308 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 ZNF208O43345 1280 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 PMS2P2O95744 297 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 GSNP06396 782 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 BMP4P12644 408 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
LINC00116-203ENST00000611969 SLC1A3P43003 542 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 IDH2P48735 452 aaKnown RBP11.99□□□□□ -0.49
LINC00116-203ENST00000611969 FUT5Q11128 374 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 SYPL1Q16563 259 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 OLIG3Q7RTU3 272 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 ADGRG3Q86Y34 549 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 MIER2Q8N344 545 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 ANKFN1Q8N957 763 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 ZFAND2BQ8WV99 257 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
LINC00116-203ENST00000611969 DDIT4LQ96D03 193 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 RAD21L1Q9H4I0 556 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 ARMC7Q9H6L4 198 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 METTL17Q9H7H0 456 aaPredicted RBP11.99□□□□□ -0.49
LINC00116-203ENST00000611969 TPT1P8Q9HAU6 139 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CACYBPQ9HB71 228 aaKnown RBP11.99□□□□□ -0.49
LINC00116-203ENST00000611969 CTPS2Q9NRF8 586 aa11.99□□□□□ -0.49
LINC00116-203ENST00000611969 TRRAPQ9Y4A5 3859 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 CCT8L1PA6NM43 557 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 HNRNPCL2B2RXH8 293 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 HNRNPCL1O60812 293 aaKnown RBP11.98□□□□□ -0.49
LINC00116-203ENST00000611969 ITGA5P08648 1049 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 RPS4Y1P22090 263 aaKnown RBP11.98□□□□□ -0.49
LINC00116-203ENST00000611969 APEX1P27695 318 aaKnown RBP11.98□□□□□ -0.49
LINC00116-203ENST00000611969 CDKN2CP42773 168 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 CRATP43155 626 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 POLR2HP52434 150 aaKnown RBP11.98□□□□□ -0.49
LINC00116-203ENST00000611969 POLR2JP52435 117 aaKnown RBP11.98□□□□□ -0.49
LINC00116-203ENST00000611969 CRISP3P54108 245 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 SLC35A1P78382 337 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 GABRA6Q16445 453 aa11.98□□□□□ -0.49
LINC00116-203ENST00000611969 SLC9B1Q4ZJI4 515 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms