RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 TP53I3Q53FA7 332 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 LCN1P1Q5VSP4 162 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ZNF574Q6ZN55 896 aaPredicted RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 POMGNT2Q8NAT1 580 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 C7orf57Q8NEG2 295 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 OMA1Q96E52 524 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ATF6BQ99941 703 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 TBL1XR1Q9BZK7 514 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 LAT2Q9GZY6 243 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 MMP25Q9NPA2 562 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ADAMTS20P59510 1910 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 IGHV3-20A0A0C4DH32 117 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 KHNYNO15037 678 aaKnown RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 TSPAN2O60636 221 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 HPGDSO60760 199 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 SPI1P17947 270 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ABCD3P28288 659 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 PI4KAP42356 2102 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 PPP3R1P63098 170 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 CARTPTQ16568 116 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ALG10Q5BKT4 473 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 FAM27D1Q5T7N8 215 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 LEG1Q6P5S2 330 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 UBALD2Q8IYN6 164 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 TP53INP1Q96A56 240 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 KTI12Q96EK9 354 aaPredicted RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 Q96M85 177 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 DUSP23Q9BVJ7 150 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 SYNDIG1Q9H7V2 258 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 SRPK3Q9UPE1 567 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 HIF3AQ9Y2N7 669 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 COL5A1P20908 1838 aaPredicted RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 A0A1W2PQ09 198 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 OR2T7P0C7T2 308 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SLC6A8P48029 635 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 GGTLC2Q14390 218 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 TAB1Q15750 504 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 TOMM34Q15785 309 aaPredicted RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 PYDC2Q56P42 97 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 RHBDD2Q6NTF9 364 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 COX15Q7KZN9 410 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SLC35F2Q8IXU6 374 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 OR2T27Q8NH04 317 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 STT3BQ8TCJ2 826 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 HPS1Q92902 700 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 DNAJA3Q96EY1 480 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 GPX7Q96SL4 187 aaPredicted RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 RNF32Q9H0A6 362 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SLC22A11Q9NSA0 550 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 HTR3EA5X5Y0 456 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 C4orf47A7E2U8 309 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SNPHO15079 494 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 TOX3O15405 576 aaPredicted RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 IDH3BO43837 385 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SELENOFO60613 162 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 IGF2P01344 180 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 F13BP05160 661 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 ASAH2BP0C7U1 165 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SHC1P29353 583 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 RPS5P46782 204 aaKnown RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 MTNR1BP49286 362 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 DIO1P49895 249 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 CTXN1P60606 82 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 DAB2P98082 770 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 ISXQ2M1V0 245 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 CEACAM19Q7Z692 300 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 FAM181AQ8N9Y4 354 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SLC38A9Q8NBW4 561 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 SNX33Q8WV41 574 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 GHSRQ92847 366 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 PGLYRP3Q96LB9 341 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 OR6C1Q96RD1 312 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 DDOQ99489 341 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 LPAR4Q99677 370 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
NEK3-205ENST00000610828 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 PCDHGB7Q9Y5F8 929 aa12.41□□□□□ -0.42
NEK3-205ENST00000610828 A0A1W2PRG6 482 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 FAM171A2A8MVW0 826 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 ALG1L2C9J202 215 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 TO15178 435 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 SCO2O43819 266 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 CD14P08571 375 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 CD53P19397 219 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 CXCR1P25024 350 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 LCN1P31025 176 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
NEK3-205ENST00000610828 CAPZA2P47755 286 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 ACTA2P62736 377 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 ACTG2P63267 376 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 LTBQ06643 244 aa12.4□□□□□ -0.42
NEK3-205ENST00000610828 NR0B2Q15466 257 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms